Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   BZJ79_RS09375 Genome accession   NZ_CP019592
Coordinates   1886660..1887400 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GD5     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1881660..1892400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZJ79_RS09350 (BZJ79_09365) hemH 1882538..1883461 (-) 924 WP_000162876.1 ferrochelatase -
  BZJ79_RS09355 (BZJ79_09370) hemE 1883518..1884555 (-) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  BZJ79_RS09360 (BZJ79_09375) - 1884545..1884631 (-) 87 WP_031875110.1 hypothetical protein -
  BZJ79_RS09365 (BZJ79_09380) traP 1884817..1885320 (+) 504 WP_000737983.1 signal transduction protein TRAP -
  BZJ79_RS09370 (BZJ79_09385) ecsB 1885444..1886667 (-) 1224 WP_001245751.1 ABC transporter permease EcsB -
  BZJ79_RS09375 (BZJ79_09390) pptA 1886660..1887400 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  BZJ79_RS09380 (BZJ79_09395) - 1887534..1887956 (+) 423 WP_084578710.1 HIT family protein -
  BZJ79_RS09385 (BZJ79_09400) - 1888098..1888463 (+) 366 WP_070956140.1 YtxH domain-containing protein -
  BZJ79_RS09390 (BZJ79_09405) - 1889195..1889752 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  BZJ79_RS09395 (BZJ79_09410) - 1889957..1890919 (+) 963 WP_000782119.1 foldase protein PrsA -
  BZJ79_RS09400 (BZJ79_09415) yhaM 1891040..1891981 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=181338 BZJ79_RS09375 WP_000216874.1 1886660..1887400(-) (pptA) [Staphylococcus aureus strain GD5]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=181338 BZJ79_RS09375 WP_000216874.1 1886660..1887400(-) (pptA) [Staphylococcus aureus strain GD5]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGACATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCGACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545

Multiple sequence alignment