Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BSA145_RS12065 Genome accession   NZ_CP015607
Coordinates   2320863..2321654 (+) Length   263 a.a.
NCBI ID   WP_075622593.1    Uniprot ID   -
Organism   Bacillus safensis strain U14-5     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2315863..2326654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA145_RS12030 (BSA145_11780) - 2315946..2316494 (+) 549 WP_075622590.1 thioredoxin family protein -
  BSA145_RS12035 (BSA145_11785) - 2316828..2317295 (+) 468 WP_075622591.1 thiol-disulfide oxidoreductase DCC family protein -
  BSA145_RS12040 (BSA145_11790) - 2317332..2318588 (-) 1257 WP_024425225.1 transcriptional regulator -
  BSA145_RS12045 (BSA145_11795) - 2318866..2319453 (+) 588 WP_024425224.1 nitroreductase family protein -
  BSA145_RS12050 (BSA145_11800) - 2319492..2319647 (-) 156 WP_024425223.1 YfhD family protein -
  BSA145_RS12055 - 2319709..2319819 (-) 111 WP_017358836.1 YfhE family protein -
  BSA145_RS12060 (BSA145_11805) - 2319872..2320768 (-) 897 WP_075622592.1 TIGR01777 family oxidoreductase -
  BSA145_RS12065 (BSA145_11810) recX 2320863..2321654 (+) 792 WP_075622593.1 recombination regulator RecX Regulator
  BSA145_RS12070 (BSA145_11815) - 2321658..2321972 (+) 315 WP_025093475.1 YfhH family protein -
  BSA145_RS12075 - 2321996..2322169 (-) 174 WP_008360604.1 YpzG family protein -
  BSA145_RS12080 (BSA145_11820) - 2322195..2322344 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  BSA145_RS12085 (BSA145_11825) - 2322461..2322732 (+) 272 Protein_2336 YfhJ family protein -
  BSA145_RS12090 (BSA145_11830) - 2323033..2324016 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30676.19 Da        Isoelectric Point: 6.9990

>NTDB_id=181327 BSA145_RS12065 WP_075622593.1 2320863..2321654(+) (recX) [Bacillus safensis strain U14-5]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEI
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEESLLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDIIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=181327 BSA145_RS12065 WP_075622593.1 2320863..2321654(+) (recX) [Bacillus safensis strain U14-5]
ATGCCCTATATTACAAAAATTTCCGCTCAGAAAAACAATACAGAGCGGGTAAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCGGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGAATGAGATCAGTGAAAGAAATC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGTAAAGGACCGTCCGTCCTAAAAAAAG
AATTAAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCGCTATCGCAATACCCTAATGACTTACAGCTGGAGGAA
GCTGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGATCTGCAAAAGAAATCGAGCAGCGCATCAAGTTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTACAAGAAGCCTATGATGGACAAGAAGAGGAAAAAG
AAGAAGAATCCCTCCTTTATATGCTGGAGAAGGCAAAACGTAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATATAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.118

100

0.631

Multiple sequence alignment