Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   BSA145_RS09810 Genome accession   NZ_CP015607
Coordinates   1838311..1838739 (-) Length   142 a.a.
NCBI ID   WP_041106613.1    Uniprot ID   A0A1L6ZHX2
Organism   Bacillus safensis strain U14-5     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1833311..1843739
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSA145_RS09780 (BSA145_09600) - 1833473..1833802 (+) 330 WP_075623666.1 YckD family protein -
  BSA145_RS09785 (BSA145_09605) - 1833846..1834610 (-) 765 WP_075622316.1 MBL fold metallo-hydrolase -
  BSA145_RS09790 (BSA145_09610) - 1834726..1835142 (+) 417 WP_075622317.1 Lrp/AsnC family transcriptional regulator -
  BSA145_RS09795 (BSA145_09615) - 1835171..1835977 (+) 807 WP_075622318.1 aminoglycoside N(3)-acetyltransferase -
  BSA145_RS09800 (BSA145_09620) - 1835979..1836365 (-) 387 WP_075622319.1 competence protein ComJ -
  BSA145_RS09805 (BSA145_09625) - 1836485..1838182 (-) 1698 WP_075622320.1 methyl-accepting chemotaxis protein -
  BSA145_RS09810 (BSA145_09630) nucA/comI 1838311..1838739 (-) 429 WP_041106613.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  BSA145_RS09820 (BSA145_09640) - 1839107..1841176 (+) 2070 WP_075622322.1 hydantoinase/oxoprolinase family protein -
  BSA145_RS09825 (BSA145_09645) - 1841166..1843154 (+) 1989 WP_075622323.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15957.94 Da        Isoelectric Point: 6.2208

>NTDB_id=181325 BSA145_RS09810 WP_041106613.1 1838311..1838739(-) (nucA/comI) [Bacillus safensis strain U14-5]
MKLLKMILLLLLIVIGVATGYIQLEQGKQETANSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKHSDDQRDRS
LHGVPTKRGYDRDEWPMAMCKEGGTGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIID

Nucleotide


Download         Length: 429 bp        

>NTDB_id=181325 BSA145_RS09810 WP_041106613.1 1838311..1838739(-) (nucA/comI) [Bacillus safensis strain U14-5]
ATGAAACTTCTTAAAATGATTCTCTTGCTTTTATTGATTGTTATTGGTGTAGCAACAGGCTATATCCAGCTGGAGCAAGG
GAAACAAGAGACAGCGAATTCATCTTATGACAAAACGATTCATTTTCCATCAGACCGCTATCCCGAAACAGCCAAGCACA
TAGAAGAAGCCATTGATGAAGGTCATTCATCCATTTGTACAATTGACCGTAAACATAGTGATGATCAGAGGGATCGATCA
TTACATGGCGTTCCAACAAAGCGCGGGTATGATCGTGACGAATGGCCAATGGCAATGTGCAAAGAAGGAGGCACAGGAGC
TTCTGTCAAATATGTACGCCCTTCTGATAATAGAGGCGCAGGCTCGTGGGTAAGTCATCAATTATCGGATGATCCTGACG
GCACAAGAATTCAATTTATCATCGATTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1L6ZHX2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

65.789

80.282

0.528

Multiple sequence alignment