Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BZJ79_RS01895 Genome accession   NZ_CP019592
Coordinates   413118..413963 (+) Length   281 a.a.
NCBI ID   WP_084578657.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GD5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 408118..418963
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZJ79_RS01875 (BZJ79_01895) - 408384..410225 (-) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  BZJ79_RS01880 (BZJ79_01900) metC 410194..411354 (-) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  BZJ79_RS01885 (BZJ79_01905) - 411351..412454 (-) 1104 WP_000655690.1 PLP-dependent transferase -
  BZJ79_RS01895 (BZJ79_01915) spo0J 413118..413963 (+) 846 WP_084578657.1 ParB/RepB/Spo0J family partition protein Regulator
  BZJ79_RS01900 (BZJ79_01920) - 414117..414998 (+) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  BZJ79_RS01905 (BZJ79_01925) - 415028..415231 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  BZJ79_RS01910 (BZJ79_01930) ychF 415243..416340 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  BZJ79_RS01915 (BZJ79_01935) - 416426..416617 (-) 192 WP_001052481.1 hypothetical protein -
  BZJ79_RS01925 (BZJ79_01945) rpsF 416861..417157 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  BZJ79_RS01930 (BZJ79_01950) ssbA 417178..417681 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  BZJ79_RS01935 (BZJ79_01955) rpsR 417733..417975 (+) 243 WP_000897044.1 30S ribosomal protein S18 -
  BZJ79_RS14645 - 418212..418439 (-) 228 Protein_370 Abi family protein -
  BZJ79_RS14460 - 418432..418708 (-) 277 Protein_371 site-specific integrase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32827.89 Da        Isoelectric Point: 10.0554

>NTDB_id=181269 BZJ79_RS01895 WP_084578657.1 413118..413963(+) (spo0J) [Staphylococcus aureus strain GD5]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIASLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=181269 BZJ79_RS01895 WP_084578657.1 413118..413963(+) (spo0J) [Staphylococcus aureus strain GD5]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTAGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.613

92.883

0.377