Detailed information NTG0181242

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: A3K93_RS07065
• Genome accession: NZ_CP015594
• Coordinates: 1484421..1485050 (-)
• Length: 209 a.a.
• NCBI ID: WP_067730205.1
• Uniprot ID: A0A172YP53
• Organism: Acinetobacter sp. NCu2D-2
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1479421..1490050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A3K93_RS07035 (A3K93_07035)	-	1479830..1480261 (-)	432	WP_067730197.1	SRPBCC family protein	-
A3K93_RS07040 (A3K93_07040)	tadA	1480293..1480841 (-)	549	WP_067730198.1	tRNA adenosine(34) deaminase TadA	-
A3K93_RS07045 (A3K93_07045)	-	1480848..1481969 (-)	1122	WP_067730199.1	enoyl-CoA hydratase/isomerase family protein	-
A3K93_RS07050 (A3K93_07050)	ung	1481966..1482679 (-)	714	WP_067730201.1	uracil-DNA glycosylase	-
A3K93_RS07055 (A3K93_07055)	-	1482732..1483328 (-)	597	WP_067730203.1	6-carboxytetrahydropterin synthase	-
A3K93_RS07060 (A3K93_07060)	gspK	1483462..1484424 (-)	963	WP_067730204.1	type II secretion system minor pseudopilin GspK	-
A3K93_RS07065 (A3K93_07065)	xcpW	1484421..1485050 (-)	630	WP_067730205.1	type II secretion system minor pseudopilin GspJ	Machinery gene
A3K93_RS07070 (A3K93_07070)	xcpV	1485047..1485448 (-)	402	WP_227509859.1	type II secretion system minor pseudopilin GspI	Machinery gene
A3K93_RS07075 (A3K93_07075)	-	1485555..1486109 (-)	555	WP_067730208.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
A3K93_RS07080 (A3K93_07080)	-	1486113..1486727 (-)	615	WP_067730210.1	TetR/AcrR family transcriptional regulator	-
A3K93_RS07085 (A3K93_07085)	-	1486773..1487546 (-)	774	WP_067730212.1	TatD family hydrolase	-
A3K93_RS07090 (A3K93_07090)	-	1487574..1487915 (-)	342	WP_067730214.1	PilZ domain-containing protein	-
A3K93_RS07095 (A3K93_07095)	-	1487931..1488917 (-)	987	WP_067730219.1	DNA polymerase III subunit delta'	-
A3K93_RS07100 (A3K93_07100)	kdsB	1488931..1489692 (-)	762	WP_067730221.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 209 a.a.
• Molecular weight: 24099.50 Da
• Isoelectric Point: 4.9108

>NTDB_id=181242 A3K93_RS07065 WP_067730205.1 1484421..1485050(-) (xcpW) [Acinetobacter sp. NCu2D-2]
MRHLGFTLVELLVAIAIFAVLSALGWKVFDHIVMTKDQNIVHEQRLDQLQQTYQQILRDTVQLVPLTSNLNVEIRPALVL
QNNKISFSKSGVTDPLQQGIAPDERVEYLYRQDEQKLYRLRYQNLNQSGREQPDSSVMLDQVERFSVEVLNPNSLTEWPE
PSANSEDLIAKQKLPRGIKINLVINQVEYEWLFSLLNTEFLEAKQGAQP

Nucleotide

• Length: 630 bp

>NTDB_id=181242 A3K93_RS07065 WP_067730205.1 1484421..1485050(-) (xcpW) [Acinetobacter sp. NCu2D-2]
ATGAGACATTTAGGTTTTACTCTCGTTGAATTATTGGTGGCAATTGCGATTTTCGCCGTATTGTCTGCTTTAGGCTGGAA
GGTGTTTGATCATATTGTGATGACCAAAGATCAAAATATTGTACATGAGCAACGTTTAGATCAATTACAGCAGACCTATC
AGCAAATCTTAAGAGATACTGTTCAACTCGTGCCTTTAACCTCAAATTTAAATGTTGAAATTCGACCTGCGCTGGTTCTG
CAAAATAATAAAATTAGTTTTAGTAAATCAGGTGTAACAGATCCTTTACAGCAGGGCATTGCACCTGATGAACGCGTAGA
ATATCTGTACCGACAAGATGAGCAAAAACTGTATCGGCTGCGTTATCAAAACTTAAATCAGTCAGGGCGTGAACAACCTG
ATTCAAGTGTGATGCTTGATCAAGTTGAGCGATTTAGCGTTGAAGTGCTGAATCCGAATAGTTTGACTGAATGGCCTGAA
CCAAGTGCGAATTCAGAGGATTTGATTGCAAAACAGAAATTGCCACGCGGAATCAAAATCAATCTTGTGATCAATCAAGT
TGAATATGAATGGTTGTTCAGTTTGCTAAATACTGAGTTTCTTGAGGCTAAACAAGGTGCTCAGCCATGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (76-192)

• Prokaryotic N-terminal methylation motif (N_methyl) (2-24)

3D structure

• AlphaFold DB: A0A172YP53

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	52.195	98.086	0.512