Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   A3K93_RS01055 Genome accession   NZ_CP015594
Coordinates   232458..234680 (-) Length   740 a.a.
NCBI ID   WP_067728120.1    Uniprot ID   A0A172YLV7
Organism   Acinetobacter sp. NCu2D-2     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 227458..239680
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A3K93_RS01035 (A3K93_01035) - 228464..228727 (-) 264 WP_067728112.1 YdcH family protein -
  A3K93_RS01040 (A3K93_01040) - 228811..229143 (-) 333 WP_067728114.1 chaperone modulator CbpM -
  A3K93_RS01045 (A3K93_01045) - 229649..230524 (-) 876 WP_067728116.1 Hsp33 family molecular chaperone HslO -
  A3K93_RS01050 (A3K93_01050) - 230575..232404 (-) 1830 WP_067728118.1 cation:proton antiporter -
  A3K93_RS01055 (A3K93_01055) priA 232458..234680 (-) 2223 WP_067728120.1 primosomal protein N' Machinery gene
  A3K93_RS01060 (A3K93_01060) gspF 234831..236036 (+) 1206 WP_067728122.1 type II secretion system inner membrane protein GspF -
  A3K93_RS01065 (A3K93_01065) gspG 236122..236556 (+) 435 WP_067728124.1 type II secretion system major pseudopilin GspG -
  A3K93_RS01070 (A3K93_01070) - 236840..237175 (+) 336 WP_067728126.1 hypothetical protein -
  A3K93_RS01075 (A3K93_01075) lnt 237418..238977 (-) 1560 WP_067728128.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83925.88 Da        Isoelectric Point: 8.5424

>NTDB_id=181230 A3K93_RS01055 WP_067728120.1 232458..234680(-) (priA) [Acinetobacter sp. NCu2D-2]
MPNSTDHTTALYRVRVAVPVHLFDCFDYLVSAEQYEQAQVGARVAVSFGRQNLVGIVMEKLALDAPVDPRFKLKPITELL
DDRAIIDAQVLQLLKWSAQYYQFPIGEVVQSALPALLRQGKPYNLLARTWKLLDLDAESKVRRSERQQEAYKVLKLHPVG
TAENILNMAGIETATLKALEKKGICECVLEPQDFSPQPVQMAQMPLKANPEQQHAIDHVLKYKNKYQAFLLDGLTGSGKT
EVYLQIMQQVLKQGKQVLVLVPEIGLTPQTISRFQSRFQCNIALLHSGLNDSKRLQAWQAAETGKASIVLGTRSAIYTPM
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLQQCPVVLGSATPSIDSYALVDHGKMQVLELNQRAGTALMPKIHI
LDLKVAQKQHGISLHLIEEMKKRLERKEQVLIFLNRRGYAPVLICDSCGWQAQCPYCDANFTVHRQPYQHLHCHHCGTVH
RLPEQCPSCQHTELKPLGMGTGKVEEHLNELFPDFDVIRVDRDSTSRVGSWQKIYDKIQKSEPAILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIVQVAGRAGRGEHKGDVYLQTLRPDHALLNTLVKDNYRAFAKQTLQERQIAMM
PPYRYAALIRCESKDQSLNTDFLQKHAAYLRQYSDLNLDIWGPIPAPMERKAGRYQSHMVLLSADRARLHYYLRAWWQNL
LSNKPSGMKVTLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=181230 A3K93_RS01055 WP_067728120.1 232458..234680(-) (priA) [Acinetobacter sp. NCu2D-2]
ATGCCAAATTCAACCGATCACACCACTGCTCTTTATCGTGTACGCGTTGCAGTGCCCGTGCATCTTTTTGATTGCTTCGA
TTATCTGGTTAGTGCAGAACAATATGAACAAGCACAAGTCGGCGCACGTGTCGCGGTTTCCTTTGGTCGTCAGAATTTAG
TTGGCATTGTGATGGAAAAGTTAGCTCTAGATGCGCCCGTCGACCCTCGTTTTAAACTTAAACCGATTACTGAACTGCTT
GATGATCGTGCAATCATAGATGCACAAGTCTTACAATTATTAAAATGGTCAGCACAGTATTACCAGTTCCCTATTGGAGA
AGTTGTACAAAGTGCTTTGCCTGCATTACTCCGTCAAGGTAAGCCTTATAACCTTTTGGCACGTACATGGAAATTACTGG
ACTTAGATGCAGAATCTAAAGTTCGCCGTTCAGAACGACAGCAAGAAGCCTATAAAGTATTAAAACTGCATCCCGTTGGG
ACAGCAGAAAATATTCTGAATATGGCAGGGATTGAAACTGCCACATTAAAAGCACTTGAGAAAAAAGGCATTTGTGAGTG
TGTGCTTGAACCACAAGATTTTAGCCCGCAGCCTGTGCAAATGGCACAAATGCCACTTAAAGCCAATCCCGAGCAACAGC
ATGCGATTGACCATGTTTTAAAATACAAAAATAAGTATCAAGCTTTTTTACTAGATGGTTTGACTGGTAGTGGCAAAACT
GAAGTTTATCTGCAAATCATGCAGCAAGTGCTTAAGCAAGGAAAACAGGTACTGGTCTTGGTGCCTGAGATTGGACTGAC
CCCACAAACCATTAGCCGCTTCCAATCACGTTTCCAATGCAATATTGCCCTATTGCATTCAGGACTGAACGACAGCAAAC
GCTTACAAGCTTGGCAAGCGGCTGAAACAGGAAAAGCTTCCATTGTACTAGGCACACGTTCCGCGATTTATACGCCGATG
CCGAATCTCGGTTTGATCATTCTCGATGAAGAGCATGATCTTTCCTTCAAACAACAAGAAGGCTTTCGCTATCATGCGAG
AGACGTTGCCCTGTATCGTGCTCATCTGCAACAATGCCCTGTGGTTTTGGGTTCAGCGACACCGAGCATCGACAGCTATG
CGCTTGTCGATCATGGCAAAATGCAGGTTTTAGAATTAAACCAACGTGCTGGTACGGCACTCATGCCGAAAATCCACATT
TTAGATTTGAAAGTCGCACAAAAGCAGCATGGCATCAGCCTGCACTTAATTGAGGAAATGAAAAAACGGCTGGAACGTAA
AGAACAGGTATTGATCTTCCTGAATCGTCGTGGTTACGCGCCTGTACTCATTTGTGATAGTTGTGGATGGCAAGCACAAT
GCCCATATTGTGATGCCAATTTCACAGTTCATCGTCAACCTTACCAGCATTTGCATTGTCACCATTGTGGCACGGTACAT
CGACTACCTGAACAATGCCCAAGTTGTCAGCATACTGAACTTAAACCGCTTGGTATGGGAACAGGGAAGGTCGAAGAGCA
CCTGAATGAACTCTTTCCTGATTTTGACGTCATTCGGGTCGATCGTGACTCCACCAGTCGTGTCGGCAGCTGGCAAAAAA
TTTACGATAAGATTCAAAAAAGTGAGCCTGCAATTTTACTTGGAACTCAAATGCTGGCAAAAGGTCATCACTTCCCTTAT
GTCACCTTGGTCGCTATTTTAGATATTGACTCAGGACTGCTTAGTGTGGATTTTCGTGCCACAGAGCGTACGGCACAATT
AATCGTACAAGTGGCAGGTCGAGCTGGTCGCGGGGAACATAAAGGCGATGTCTATCTACAAACCTTGCGTCCCGATCATG
CTCTATTAAATACCTTGGTGAAGGACAACTATCGCGCATTTGCCAAGCAGACCTTACAAGAACGACAAATTGCCATGATG
CCGCCTTATCGTTATGCGGCGCTGATTCGCTGTGAATCTAAGGATCAAAGTTTAAATACAGATTTCTTACAGAAACATGC
TGCTTATCTTCGTCAATACAGTGATTTGAATCTCGATATATGGGGACCAATTCCTGCCCCTATGGAGCGTAAAGCGGGTC
GTTACCAATCGCATATGGTTTTGCTTTCCGCAGATCGTGCACGTCTACATTATTACTTAAGAGCATGGTGGCAAAACCTA
TTAAGTAATAAACCATCTGGCATGAAAGTGACCTTAGATATTGACCCTCAAGAATTAAGCTAA

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(207-369)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A172YLV7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.526

99.189

0.709

Multiple sequence alignment