Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   BZP34_RS04150 Genome accession   NZ_CP019563
Coordinates   781370..782521 (-) Length   383 a.a.
NCBI ID   WP_000020360.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SR434     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 776370..787521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZP34_RS04130 (BZP34_04130) - 776766..777563 (-) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -
  BZP34_RS04135 (BZP34_04135) - 777737..777952 (+) 216 WP_077156059.1 hypothetical protein -
  BZP34_RS04140 (BZP34_04140) rny 778249..779808 (-) 1560 WP_001050913.1 ribonuclease Y -
  BZP34_RS04145 (BZP34_04145) recA 780162..781205 (-) 1044 WP_000368166.1 recombinase RecA Machinery gene
  BZP34_RS04150 (BZP34_04150) cinA 781370..782521 (-) 1152 WP_000020360.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  BZP34_RS04155 (BZP34_04155) pgsA 782747..783325 (-) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  BZP34_RS04160 (BZP34_04160) - 783359..783751 (-) 393 WP_000859443.1 helix-turn-helix domain-containing protein -
  BZP34_RS04165 (BZP34_04165) - 783770..784597 (-) 828 WP_000214890.1 YmfK family protein -
  BZP34_RS04170 (BZP34_04170) ymfI 784702..785406 (-) 705 WP_077156060.1 elongation factor P 5-aminopentanone reductase -
  BZP34_RS04175 (BZP34_04175) yfmH 785406..786692 (-) 1287 WP_000664769.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43211.48 Da        Isoelectric Point: 5.9365

>NTDB_id=181040 BZP34_RS04150 WP_000020360.1 781370..782521(-) (cinA) [Staphylococcus aureus strain SR434]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINDNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNLEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=181040 BZP34_RS04150 WP_000020360.1 781370..782521(-) (cinA) [Staphylococcus aureus strain SR434]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGTTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAACAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACGATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
AGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.146

100

0.431


Multiple sequence alignment