Detailed information NTG0180872

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BZY78_RS17870
• Genome accession: NZ_CP019560
• Coordinates: 3464993..3466018 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain KSC1031
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3459993..3471018

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BZY78_RS17840 (BZY78_18115)	zapB	3460077..3460322 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
BZY78_RS17845 (BZY78_18120)	rraA	3460407..3460892 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BZY78_RS17850 (BZY78_18125)	menA	3460985..3461911 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BZY78_RS17855 (BZY78_18130)	hslU	3461978..3463309 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
BZY78_RS17860 (BZY78_18135)	hslV	3463319..3463849 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BZY78_RS17865 (BZY78_18140)	ftsN	3463942..3464901 (-)	960	WP_000068834.1	cell division protein FtsN	-
BZY78_RS17870 (BZY78_18145)	cytR	3464993..3466018 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
BZY78_RS17875 (BZY78_18150)	priA	3466174..3468372 (-)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
BZY78_RS17880 (BZY78_18155)	rpmE	3468575..3468787 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=180872 BZY78_RS17870 WP_000644904.1 3464993..3466018(-) (cytR) [Escherichia coli strain KSC1031]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=180872 BZY78_RS17870 WP_000644904.1 3464993..3466018(-) (cytR) [Escherichia coli strain KSC1031]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCCAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628