Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | A2I67_RS06320 | Genome accession | NZ_CP015533 |
| Coordinates | 1237592..1237951 (-) | Length | 119 a.a. |
| NCBI ID | WP_308669860.1 | Uniprot ID | - |
| Organism | Staphylococcus carnosus strain TMW 2.216 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1232592..1242951
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A2I67_RS06305 (A2I67_06165) | - | 1232683..1233855 (+) | 1173 | WP_253718447.1 | site-specific integrase | - |
| A2I67_RS06310 (A2I67_06170) | - | 1233839..1234531 (+) | 693 | WP_115359461.1 | hypothetical protein | - |
| A2I67_RS06315 (A2I67_06175) | - | 1235238..1237127 (-) | 1890 | WP_115359460.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| A2I67_RS06320 (A2I67_06180) | comGA | 1237592..1237951 (-) | 360 | WP_308669860.1 | ATPase, T2SS/T4P/T4SS family | Machinery gene |
| A2I67_RS06325 (A2I67_06185) | - | 1238084..1238707 (-) | 624 | WP_015900416.1 | MBL fold metallo-hydrolase | - |
| A2I67_RS06330 (A2I67_06190) | - | 1238707..1239036 (-) | 330 | WP_015900417.1 | MTH1187 family thiamine-binding protein | - |
| A2I67_RS06335 (A2I67_06195) | - | 1239036..1240022 (-) | 987 | WP_103211985.1 | ROK family glucokinase | - |
| A2I67_RS06340 (A2I67_06200) | - | 1240022..1240222 (-) | 201 | WP_015900419.1 | YqgQ family protein | - |
| A2I67_RS06345 (A2I67_06205) | - | 1240203..1241663 (-) | 1461 | WP_046099268.1 | rhomboid family intramembrane serine protease | - |
| A2I67_RS06350 (A2I67_06210) | - | 1241680..1242222 (-) | 543 | WP_046099267.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
Sequence
Protein
Download Length: 119 a.a. Molecular weight: 13863.16 Da Isoelectric Point: 9.2729
>NTDB_id=180465 A2I67_RS06320 WP_308669860.1 1237592..1237951(-) (comGA) [Staphylococcus carnosus strain TMW 2.216]
MPIEKEVIIKFRIHDDLINYDNIEILTYLKLLTFMKFQAVLDVSNYHQAQSGQTTFKHQKLYNLRVSTLPLSLGIESCVI
RLSPQYFYQDTARDGPKHFYHLMNKKQGLILFTGPTGVL
MPIEKEVIIKFRIHDDLINYDNIEILTYLKLLTFMKFQAVLDVSNYHQAQSGQTTFKHQKLYNLRVSTLPLSLGIESCVI
RLSPQYFYQDTARDGPKHFYHLMNKKQGLILFTGPTGVL
Nucleotide
Download Length: 360 bp
>NTDB_id=180465 A2I67_RS06320 WP_308669860.1 1237592..1237951(-) (comGA) [Staphylococcus carnosus strain TMW 2.216]
ATTCCAATTGAAAAAGAAGTTATAATCAAGTTCAGAATTCACGATGATTTAATTAATTATGACAATATCGAAATTCTGAC
TTATTTAAAGTTACTTACGTTTATGAAATTTCAAGCAGTGCTCGATGTATCTAATTATCATCAAGCACAAAGTGGTCAGA
CAACTTTCAAGCATCAAAAACTATATAATTTACGTGTTTCTACTTTACCGTTATCCTTAGGGATTGAGAGTTGTGTAATA
CGACTTTCACCCCAGTATTTTTATCAAGATACCGCTCGTGATGGTCCTAAACACTTCTATCATTTAATGAATAAAAAGCA
AGGACTTATTTTATTCACGGGACCAACCGGGGTATTATGA
ATTCCAATTGAAAAAGAAGTTATAATCAAGTTCAGAATTCACGATGATTTAATTAATTATGACAATATCGAAATTCTGAC
TTATTTAAAGTTACTTACGTTTATGAAATTTCAAGCAGTGCTCGATGTATCTAATTATCATCAAGCACAAAGTGGTCAGA
CAACTTTCAAGCATCAAAAACTATATAATTTACGTGTTTCTACTTTACCGTTATCCTTAGGGATTGAGAGTTGTGTAATA
CGACTTTCACCCCAGTATTTTTATCAAGATACCGCTCGTGATGGTCCTAAACACTTCTATCATTTAATGAATAAAAAGCA
AGGACTTATTTTATTCACGGGACCAACCGGGGTATTATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
57.265 |
98.319 |
0.563 |
| comGA | Staphylococcus aureus N315 |
57.265 |
98.319 |
0.563 |
| pilB | Glaesserella parasuis strain SC1401 |
36.508 |
100 |
0.387 |