Detailed information NTG0180234

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FORC36_RS13995
• Genome accession: NZ_CP015512
• Coordinates: 2912302..2913309 (+)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_036
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2907302..2918309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC36_RS13975 (FORC36_2605)	metJ	2907407..2907724 (+)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-
FORC36_RS13980 (FORC36_2606)	-	2907811..2909088 (-)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
FORC36_RS13985 (FORC36_2607)	rpmE	2909367..2909588 (-)	222	WP_011079336.1	50S ribosomal protein L31	-
FORC36_RS13990 (FORC36_2608)	priA	2909869..2912073 (+)	2205	WP_085761373.1	primosomal protein N'	-
FORC36_RS13995 (FORC36_2609)	cytR	2912302..2913309 (+)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
FORC36_RS14000 (FORC36_2610)	-	2913419..2913976 (+)	558	WP_085761374.1	SPOR domain-containing protein	-
FORC36_RS14005 (FORC36_2611)	hslV	2914127..2914681 (+)	555	WP_017419639.1	ATP-dependent protease subunit HslV	-
FORC36_RS14010 (FORC36_2612)	hslU	2914709..2916040 (+)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
FORC36_RS14015 (FORC36_2613)	-	2916206..2917123 (+)	918	WP_085761375.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FORC36_RS14020 (FORC36_2614)	rraA	2917199..2917720 (+)	522	WP_085761376.1	ribonuclease E activity regulator RraA	-
FORC36_RS14025 (FORC36_2615)	zapB	2917942..2918184 (+)	243	WP_011079328.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=180234 FORC36_RS13995 WP_011079334.1 2912302..2913309(+) (cytR) [Vibrio vulnificus strain FORC_036]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=180234 FORC36_RS13995 WP_011079334.1 2912302..2913309(+) (cytR) [Vibrio vulnificus strain FORC_036]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCAGTGTTGGAAGCTGGTTATTCCCCAAACTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTGTTGCTCGGTACCGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACTATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCCCAGGATCT
GTCGATTGTCGGCTTCGATGACATCCAGTTCGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAGCCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGACATGACATTCACAGTGGCTCACGCTTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCAGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875