Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | A4W73_RS03660 | Genome accession | NZ_CP015493 |
| Coordinates | 706546..707547 (+) | Length | 333 a.a. |
| NCBI ID | WP_076786758.1 | Uniprot ID | - |
| Organism | Latilactobacillus curvatus strain TMW 1.1381 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 701546..712547
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4W73_RS03620 (A4W73_03610) | - | 701723..702736 (+) | 1014 | WP_081394496.1 | YeiH family protein | - |
| A4W73_RS03625 (A4W73_03615) | - | 702827..703066 (-) | 240 | WP_004270892.1 | cytochrome b5 domain-containing protein | - |
| A4W73_RS03630 (A4W73_03620) | - | 703260..703595 (+) | 336 | WP_076786752.1 | hypothetical protein | - |
| A4W73_RS03640 (A4W73_03630) | - | 703776..704153 (-) | 378 | WP_039099519.1 | hypothetical protein | - |
| A4W73_RS03645 (A4W73_03635) | - | 704256..704756 (+) | 501 | WP_076789374.1 | VanZ family protein | - |
| A4W73_RS03650 (A4W73_03640) | - | 704846..705577 (+) | 732 | WP_004270897.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| A4W73_RS03655 (A4W73_03645) | comGA | 705681..706556 (+) | 876 | WP_076786756.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A4W73_RS03660 (A4W73_03650) | comGB | 706546..707547 (+) | 1002 | WP_076786758.1 | type II secretion system F family protein | Machinery gene |
| A4W73_RS03665 (A4W73_03655) | comGC | 707544..707852 (+) | 309 | WP_004270901.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| A4W73_RS03670 (A4W73_03660) | - | 707884..708276 (+) | 393 | WP_004270899.1 | hypothetical protein | - |
| A4W73_RS03675 (A4W73_03665) | - | 708341..708568 (+) | 228 | WP_158070299.1 | hypothetical protein | - |
| A4W73_RS10180 | - | 708534..708617 (+) | 84 | Protein_707 | type II secretion system protein | - |
| A4W73_RS03680 (A4W73_03670) | - | 708639..709019 (+) | 381 | WP_004270914.1 | ComGF family competence protein | - |
| A4W73_RS03685 (A4W73_03675) | - | 708997..709320 (+) | 324 | WP_039099486.1 | hypothetical protein | - |
| A4W73_RS03690 (A4W73_03680) | - | 709436..710455 (+) | 1020 | WP_311318493.1 | class I SAM-dependent methyltransferase | - |
| A4W73_RS03695 (A4W73_03685) | - | 710477..711670 (+) | 1194 | WP_004270911.1 | acetate kinase | - |
| A4W73_RS03700 (A4W73_03690) | - | 711730..712182 (+) | 453 | WP_056967146.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 37893.09 Da Isoelectric Point: 9.6278
>NTDB_id=180015 A4W73_RS03660 WP_076786758.1 706546..707547(+) (comGB) [Latilactobacillus curvatus strain TMW 1.1381]
MKTKTTVQFNTEFMLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQTGLEAGKRLAPSLAAVSFPAHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
AGALISVYFFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSPLQQMAKEVDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
MKTKTTVQFNTEFMLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQTGLEAGKRLAPSLAAVSFPAHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
AGALISVYFFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSPLQQMAKEVDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
Nucleotide
Download Length: 1002 bp
>NTDB_id=180015 A4W73_RS03660 WP_076786758.1 706546..707547(+) (comGB) [Latilactobacillus curvatus strain TMW 1.1381]
ATGAAGACTAAAACCACTGTTCAATTCAATACTGAATTTATGTTGCTGTTAGGTCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCACTTGAGTTCATGCCGATTGTTTTTCCGACGCAAAAGCAGTGGCTGCATCAGGTGCAAACTGGGTTAGAAG
CAGGAAAACGACTAGCACCAAGCTTAGCGGCGGTTTCGTTTCCAGCACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGAATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GCTGGTGCTCTGATTAGTGTGTATTTTTTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGTTTATTATTTGATTTAGCGACTTGCCTGAATAACGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACATCGTGGCTTGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAAGGGGGCACGCTATTGGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCCGTTACAACAGATGGCCAAGGAGGTTGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
ATGAAGACTAAAACCACTGTTCAATTCAATACTGAATTTATGTTGCTGTTAGGTCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCACTTGAGTTCATGCCGATTGTTTTTCCGACGCAAAAGCAGTGGCTGCATCAGGTGCAAACTGGGTTAGAAG
CAGGAAAACGACTAGCACCAAGCTTAGCGGCGGTTTCGTTTCCAGCACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGAATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GCTGGTGCTCTGATTAGTGTGTATTTTTTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGTTTATTATTTGATTTAGCGACTTGCCTGAATAACGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACATCGTGGCTTGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAAGGGGGCACGCTATTGGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCCGTTACAACAGATGGCCAAGGAGGTTGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Latilactobacillus sakei subsp. sakei 23K |
56.677 |
100 |
0.574 |