Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   BWQ98_RS08895 Genome accession   NZ_CP019299
Coordinates   1666126..1666836 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain HKU1-14     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1661126..1671836
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWQ98_RS08875 (BWQ98_08885) - 1661667..1661915 (-) 249 WP_000364990.1 YneF family protein -
  BWQ98_RS08880 (BWQ98_08890) treC 1662171..1663796 (-) 1626 WP_050233417.1 alpha,alpha-phosphotrehalase -
  BWQ98_RS08890 (BWQ98_08900) treP 1663974..1665941 (-) 1968 WP_000514350.1 PTS system trehalose-specific EIIBC component -
  BWQ98_RS08895 (BWQ98_08905) treR 1666126..1666836 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  BWQ98_RS08905 (BWQ98_08915) - 1666991..1668317 (+) 1327 Protein_1688 ISL3 family transposase -
  BWQ98_RS08910 (BWQ98_08920) - 1668392..1669318 (-) 927 WP_001291293.1 ATP-binding cassette domain-containing protein -
  BWQ98_RS08915 (BWQ98_08925) amiE 1669329..1670396 (-) 1068 WP_000159554.1 oligopeptide/dipeptide ABC transporter ATP-binding protein Regulator
  BWQ98_RS08920 (BWQ98_08930) amiD 1670405..1671331 (-) 927 WP_000103697.1 oligopeptide ABC transporter permease OppC Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=179952 BWQ98_RS08895 WP_000760673.1 1666126..1666836(+) (treR) [Streptococcus pneumoniae strain HKU1-14]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=179952 BWQ98_RS08895 WP_000760673.1 1666126..1666836(+) (treR) [Streptococcus pneumoniae strain HKU1-14]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTAATCCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593