Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | A6V38_RS08200 | Genome accession | NZ_CP015447 |
| Coordinates | 1626371..1626670 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain M92 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1621371..1631670
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6V38_RS08175 (A6V38_08200) | gcvPA | 1622583..1623929 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| A6V38_RS08180 (A6V38_08205) | gcvT | 1623949..1625040 (-) | 1092 | WP_000093351.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| A6V38_RS08185 (A6V38_08210) | - | 1625199..1625723 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| A6V38_RS08190 (A6V38_08215) | - | 1625713..1625859 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| A6V38_RS08195 (A6V38_08220) | comGF | 1625956..1626453 (-) | 498 | WP_001803317.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| A6V38_RS08200 (A6V38_08225) | comGE | 1626371..1626670 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| A6V38_RS08205 (A6V38_08230) | comGD | 1626657..1627103 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| A6V38_RS08210 (A6V38_08235) | comGC | 1627081..1627392 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| A6V38_RS08215 (A6V38_08240) | comGB | 1627406..1628476 (-) | 1071 | WP_000775706.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| A6V38_RS08220 (A6V38_08245) | comGA | 1628448..1629422 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A6V38_RS08225 (A6V38_08250) | - | 1629474..1630097 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| A6V38_RS08230 (A6V38_08255) | - | 1630094..1630423 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| A6V38_RS08235 (A6V38_08260) | - | 1630423..1631409 (-) | 987 | WP_061843225.1 | ROK family glucokinase | - |
| A6V38_RS08240 (A6V38_08265) | - | 1631406..1631609 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=179923 A6V38_RS08200 WP_000844413.1 1626371..1626670(-) (comGE) [Staphylococcus aureus strain M92]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=179923 A6V38_RS08200 WP_000844413.1 1626371..1626670(-) (comGE) [Staphylococcus aureus strain M92]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |