Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   BWQ98_RS00830 Genome accession   NZ_CP019299
Coordinates   154766..155206 (-) Length   146 a.a.
NCBI ID   WP_000861968.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain HKU1-14     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 149766..160206
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWQ98_RS00800 (BWQ98_00800) - 150027..151313 (+) 1287 WP_000278868.1 response regulator transcription factor -
  BWQ98_RS00805 (BWQ98_00805) - 151365..151898 (+) 534 WP_000729030.1 hypothetical protein -
  BWQ98_RS00810 (BWQ98_00810) nrdI 151976..152446 (+) 471 WP_000849621.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  BWQ98_RS00820 (BWQ98_00820) - 152739..154001 (-) 1263 WP_000075789.1 NRAMP family divalent metal transporter -
  BWQ98_RS00825 (BWQ98_00825) - 154311..154769 (-) 459 WP_000745054.1 DUF3021 domain-containing protein -
  BWQ98_RS00830 (BWQ98_00830) brsR 154766..155206 (-) 441 WP_000861968.1 LytTR family DNA-binding domain-containing protein Regulator
  BWQ98_RS00840 (BWQ98_00840) hexB 155562..157511 (+) 1950 WP_000018169.1 DNA mismatch repair endonuclease MutL Machinery gene
  BWQ98_RS00845 (BWQ98_00845) ribE 157836..158303 (-) 468 WP_001099502.1 6,7-dimethyl-8-ribityllumazine synthase -
  BWQ98_RS00850 (BWQ98_00850) - 158304..159509 (-) 1206 WP_127244976.1 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II -
  BWQ98_RS00855 (BWQ98_00855) ribE 159529..160164 (-) 636 WP_000493842.1 riboflavin synthase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17137.81 Da        Isoelectric Point: 5.9797

>NTDB_id=179889 BWQ98_RS00830 WP_000861968.1 154766..155206(-) (brsR) [Streptococcus pneumoniae strain HKU1-14]
MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLVEIFLKNESFTYSSRRYLKTIKEKLEL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=179889 BWQ98_RS00830 WP_000861968.1 154766..155206(-) (brsR) [Streptococcus pneumoniae strain HKU1-14]
ATGAAAGTAGAACTACAGATTAGTGAGACTTACGAGGAGGAAAAGCTGATTGTCCAAGCACCTCAGCCGACAGATAAAGT
CCAGAAAGTCATCGAGTTCGCAGAAAATCTGGACCAAAGAGAAAAAATCAAAGGGAAAATCGATGATCAGGTCTATCTAG
TTGAGATTGGCAAGATTCAGCGCTTCTATATCGAGAATCGGAAGGTTCTAGCAGAAACCGCGAGTCAGACCTACAGCATT
GATTTGCGACTCTATCAGGTTCTTAAACTCTTGCCAACCAATTTTATCCAAATTTCCCAATCAGAAATCATCAATATCGA
TTCCATCTCTCACCTCAAGCTCACGCCAAACGGTCTGGTAGAAATTTTCTTGAAAAACGAAAGCTTCACCTACTCTTCAC
GCCGTTATCTAAAAACCATCAAGGAGAAATTAGAACTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.054

100

0.363