Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   A1D33_RS03760 Genome accession   NZ_CP015443
Coordinates   897034..897987 (-) Length   317 a.a.
NCBI ID   WP_015417205.1    Uniprot ID   -
Organism   Bacillus velezensis strain CC09     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 892034..902987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A1D33_RS03730 (A1D33_003730) - 892188..893174 (-) 987 WP_031378493.1 ABC transporter ATP-binding protein -
  A1D33_RS03735 (A1D33_003735) - 893348..894133 (-) 786 WP_012117278.1 DUF2268 domain-containing protein -
  A1D33_RS03740 (A1D33_003740) fabF 894216..895454 (-) 1239 WP_015417206.1 beta-ketoacyl-ACP synthase II -
  A1D33_RS03745 (A1D33_003745) - 895477..896415 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  A1D33_RS03750 (A1D33_003750) - 896583..896801 (+) 219 WP_007409123.1 hypothetical protein -
  A1D33_RS03755 (A1D33_003755) comZ 896830..897021 (-) 192 WP_061861349.1 ComZ family protein Regulator
  A1D33_RS03760 (A1D33_003760) med 897034..897987 (-) 954 WP_015417205.1 BMP family ABC transporter substrate-binding protein Regulator
  A1D33_RS03765 (A1D33_003765) - 898077..898643 (-) 567 WP_015417204.1 NAD(P) binding enzyme -
  A1D33_RS03770 (A1D33_003770) - 898726..899460 (-) 735 WP_015417203.1 hypothetical protein -
  A1D33_RS03780 (A1D33_003780) - 899721..899906 (+) 186 WP_007409129.1 YjzD family protein -
  A1D33_RS03785 (A1D33_003785) - 899944..900123 (-) 180 WP_003155070.1 YjzC family protein -
  A1D33_RS03790 (A1D33_003790) argF 900199..901170 (-) 972 WP_062623311.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35328.96 Da        Isoelectric Point: 4.6686

>NTDB_id=179827 A1D33_RS03760 WP_015417205.1 897034..897987(-) (med) [Bacillus velezensis strain CC09]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGSLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=179827 A1D33_RS03760 WP_015417205.1 897034..897987(-) (med) [Bacillus velezensis strain CC09]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TTCGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.233

100

0.782

Multiple sequence alignment