Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   A1D33_RS02370 Genome accession   NZ_CP015443
Coordinates   633860..634324 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain CC09     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 628860..639324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A1D33_RS02345 (A1D33_002345) - 629366..629914 (-) 549 WP_040238195.1 hypothetical protein -
  A1D33_RS02350 (A1D33_002350) fadH 630028..630792 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  A1D33_RS02355 (A1D33_002355) - 630937..631800 (+) 864 WP_039251611.1 metallophosphoesterase -
  A1D33_RS02360 (A1D33_002360) - 631875..632369 (+) 495 WP_095284082.1 L,D-transpeptidase family protein -
  A1D33_RS02365 (A1D33_002365) - 632445..633737 (+) 1293 WP_015239757.1 MFS transporter -
  A1D33_RS02370 (A1D33_002370) kre 633860..634324 (+) 465 WP_003154622.1 YkyB family protein Regulator
  A1D33_RS02375 (A1D33_002375) cheV 634368..635279 (-) 912 WP_039251615.1 chemotaxis protein CheV -
  A1D33_RS20990 - 635468..635629 (+) 162 WP_007409608.1 hypothetical protein -
  A1D33_RS02380 (A1D33_002380) - 635830..637043 (+) 1214 Protein_483 aminotransferase A -
  A1D33_RS02385 (A1D33_002385) - 637024..638844 (-) 1821 WP_015417363.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=179819 A1D33_RS02370 WP_003154622.1 633860..634324(+) (kre) [Bacillus velezensis strain CC09]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=179819 A1D33_RS02370 WP_003154622.1 633860..634324(+) (kre) [Bacillus velezensis strain CC09]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment