Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   ABE65_RS13755 Genome accession   NZ_CP015378
Coordinates   2659344..2661041 (-) Length   565 a.a.
NCBI ID   WP_066396004.1    Uniprot ID   A0A168W425
Organism   Fictibacillus phosphorivorans strain G25-29     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2654344..2666041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABE65_RS13740 (ABE65_013740) - 2656542..2656778 (+) 237 WP_066395999.1 DUF2627 domain-containing protein -
  ABE65_RS13745 (ABE65_013745) spo0A 2656821..2657624 (-) 804 WP_066400184.1 sporulation transcription factor Spo0A -
  ABE65_RS13750 (ABE65_013750) spoIVB 2657922..2659208 (-) 1287 WP_066396002.1 SpoIVB peptidase -
  ABE65_RS13755 (ABE65_013755) recN 2659344..2661041 (-) 1698 WP_066396004.1 DNA repair protein RecN Machinery gene
  ABE65_RS13760 (ABE65_013760) ahrC 2661066..2661515 (-) 450 WP_066396006.1 transcriptional regulator AhrC/ArgR -
  ABE65_RS13765 (ABE65_013765) - 2661623..2662441 (-) 819 WP_066396009.1 TlyA family RNA methyltransferase -
  ABE65_RS13770 (ABE65_013770) dxs 2662438..2664336 (-) 1899 WP_066400186.1 1-deoxy-D-xylulose-5-phosphate synthase -
  ABE65_RS13775 (ABE65_013775) - 2664357..2664953 (-) 597 WP_066396012.1 hypothetical protein -

Sequence

Protein


Download         Length: 565 a.a.        Molecular weight: 63769.82 Da        Isoelectric Point: 5.3020

>NTDB_id=179021 ABE65_RS13755 WP_066396004.1 2659344..2661041(-) (recN) [Fictibacillus phosphorivorans strain G25-29]
MLAELSIRNFAIIDSLSVSFSKGLTVLTGETGAGKSIIIDAIGLLIGGRGSTEFVRYGTQKAEIEGLFHIHPGHRVYNKC
EEFGIAISDEDEMVVLKRDITENGKSICRVNGKLVTLSVLKEIGQALVDIHGQHETQYLMQPDKHLFLLDSFGDKDFKQE
LMSYESTFKDYKEINKQLSELSRNEQEIAQRIDLLEYQYQEIAGSNLIPDEDVKLEEEKRMLSNFERIHGSLQDAYHNLY
GEGKALELVSSALADFSQVAALDESLKADEEQFGNSFYVLEELTYKIRDMFDSLEYNPERLNSIESRLDELSKLKRKYGS
SVKEMIDYSEKIKKELELIQNKDNHIEELKKKQEKLIGKLEVSGKKLTKRRTETAKVLKNSIQQQLKELYMEKTKFEVVM
KRIEDDQFLKTGLDSVEFYISPNPGEPLKPLSKVASGGELSRIILALKTIFSENQGITAIIFDEVDTGVSGRVAQAIAEK
IYKVSVGSQVLCISHLPQVAAMSDTHLHISKDTLQGRTVTKVLTLKTDEKVNEIGRMISGVEITDLTRQHAQELLELAAS
IKKTS

Nucleotide


Download         Length: 1698 bp        

>NTDB_id=179021 ABE65_RS13755 WP_066396004.1 2659344..2661041(-) (recN) [Fictibacillus phosphorivorans strain G25-29]
TTGCTGGCAGAATTAAGTATTCGTAATTTTGCTATTATTGATTCTTTGAGTGTTTCTTTTAGTAAAGGATTAACCGTACT
TACAGGTGAAACAGGAGCAGGGAAGTCCATCATCATCGATGCGATCGGTCTTCTGATCGGTGGGCGTGGCTCTACAGAAT
TTGTACGCTATGGTACTCAAAAAGCAGAGATCGAAGGCTTGTTTCATATTCATCCGGGTCATCGTGTTTATAATAAATGT
GAAGAATTTGGAATTGCGATTTCGGATGAAGATGAGATGGTCGTGCTAAAAAGAGATATTACGGAGAACGGGAAAAGCAT
TTGCAGAGTAAACGGGAAGCTTGTTACATTGTCTGTTCTAAAAGAGATCGGACAGGCATTAGTAGATATTCATGGGCAGC
ATGAAACGCAATATTTAATGCAGCCTGACAAGCATCTTTTTTTACTCGATAGCTTTGGTGATAAGGATTTTAAACAAGAG
TTGATGTCGTACGAATCAACATTCAAAGACTATAAAGAAATTAATAAACAGCTGTCTGAGCTCTCTAGAAATGAACAAGA
GATCGCACAGAGAATTGATCTGCTCGAATATCAATATCAAGAAATAGCAGGTAGCAATCTTATTCCTGATGAAGATGTTA
AGCTTGAGGAAGAAAAACGAATGCTTTCGAATTTTGAAAGAATTCACGGCTCTCTTCAGGATGCTTATCATAATCTTTAT
GGGGAAGGAAAGGCACTTGAACTCGTTTCTAGTGCACTTGCTGATTTTTCACAAGTTGCAGCACTTGATGAGTCATTAAA
AGCTGATGAAGAACAATTTGGAAACAGCTTTTATGTGCTTGAAGAGCTTACATATAAGATTCGGGACATGTTTGATTCCT
TAGAATACAACCCGGAAAGGCTTAACAGCATAGAATCACGTCTTGATGAACTGAGTAAGCTTAAACGCAAATATGGTTCT
TCAGTAAAAGAAATGATCGATTATAGTGAAAAGATCAAAAAAGAGTTAGAACTCATTCAAAATAAGGATAATCATATTGA
AGAACTCAAGAAAAAGCAGGAAAAGCTTATAGGTAAACTTGAGGTATCAGGTAAGAAGCTGACTAAGCGAAGAACGGAGA
CCGCTAAAGTCTTAAAAAACAGCATTCAGCAACAGCTAAAAGAACTTTATATGGAAAAAACAAAGTTTGAAGTTGTGATG
AAGCGAATTGAAGATGATCAATTTTTGAAGACTGGATTGGATTCTGTAGAATTTTACATCTCTCCGAATCCTGGGGAACC
GCTTAAACCACTCTCAAAAGTAGCATCAGGTGGCGAACTCTCAAGGATTATCTTAGCGTTGAAAACCATTTTCTCTGAAA
ATCAAGGGATCACCGCGATCATCTTTGATGAAGTGGATACTGGGGTTTCTGGACGAGTTGCTCAAGCGATAGCGGAAAAG
ATCTATAAAGTTTCTGTCGGTTCACAAGTACTTTGTATTTCTCACCTGCCACAAGTTGCAGCGATGTCTGACACCCATCT
TCATATCTCTAAGGACACACTTCAAGGAAGAACGGTTACAAAGGTCCTAACATTAAAAACAGATGAAAAAGTAAATGAGA
TAGGCAGAATGATCTCTGGTGTTGAGATTACTGATCTTACTAGGCAACATGCTCAAGAATTATTAGAGCTAGCAGCGTCC
ATCAAAAAGACATCATAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A168W425

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

53.899

100

0.55

Multiple sequence alignment