Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABE65_RS07420 Genome accession   NZ_CP015378
Coordinates   1448264..1448440 (+) Length   58 a.a.
NCBI ID   WP_066393080.1    Uniprot ID   -
Organism   Fictibacillus phosphorivorans strain G25-29     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1443264..1453440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABE65_RS07380 (ABE65_007385) - 1443562..1444023 (+) 462 WP_066393065.1 molybdenum cofactor biosynthesis protein MoaE -
  ABE65_RS07385 (ABE65_007390) moaD 1444023..1444262 (+) 240 WP_066399897.1 molybdopterin converting factor subunit 1 -
  ABE65_RS07390 (ABE65_007395) - 1444479..1444772 (-) 294 WP_416202865.1 HNH endonuclease -
  ABE65_RS07395 (ABE65_007400) - 1444869..1445192 (+) 324 WP_066393070.1 hypothetical protein -
  ABE65_RS07400 (ABE65_007405) - 1445283..1445462 (+) 180 WP_066393073.1 YjzC family protein -
  ABE65_RS07405 (ABE65_007410) - 1445502..1445681 (-) 180 WP_066393075.1 YjzD family protein -
  ABE65_RS07410 (ABE65_007415) - 1446076..1446813 (+) 738 WP_066393077.1 hypothetical protein -
  ABE65_RS07415 (ABE65_007420) - 1446928..1447839 (+) 912 WP_066393078.1 NAD-dependent epimerase/dehydratase family protein -
  ABE65_RS07420 (ABE65_007425) comZ 1448264..1448440 (+) 177 WP_066393080.1 ComZ family protein Regulator
  ABE65_RS07425 (ABE65_007430) - 1448483..1448782 (-) 300 WP_066393082.1 YppG family protein -
  ABE65_RS07430 (ABE65_007435) - 1449043..1449975 (+) 933 WP_066393088.1 beta-ketoacyl-ACP synthase III -
  ABE65_RS07435 (ABE65_007440) fabF 1450020..1451258 (+) 1239 WP_066393090.1 beta-ketoacyl-ACP synthase II -
  ABE65_RS07440 (ABE65_007445) - 1451397..1452143 (+) 747 WP_066393092.1 YjbA family protein -
  ABE65_RS07445 (ABE65_007450) trpS 1452229..1453218 (-) 990 WP_066393094.1 tryptophan--tRNA ligase -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6764.93 Da        Isoelectric Point: 4.3178

>NTDB_id=179009 ABE65_RS07420 WP_066393080.1 1448264..1448440(+) (comZ) [Fictibacillus phosphorivorans strain G25-29]
MDTERNMKFMQIAMSHMPEAQAFLEKKGIEIGMEDVQPMLQLLMNVMNDAYELGKEEK

Nucleotide


Download         Length: 177 bp        

>NTDB_id=179009 ABE65_RS07420 WP_066393080.1 1448264..1448440(+) (comZ) [Fictibacillus phosphorivorans strain G25-29]
ATGGATACAGAACGCAACATGAAATTTATGCAGATCGCTATGTCGCATATGCCAGAAGCACAAGCATTTTTAGAGAAAAA
GGGAATTGAGATCGGCATGGAAGATGTTCAGCCGATGCTTCAGCTCTTAATGAACGTGATGAATGATGCTTACGAACTTG
GAAAAGAAGAAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

52.727

94.828

0.5

Multiple sequence alignment