Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | A6R75_RS04235 | Genome accession | NZ_CP015377 |
| Coordinates | 874455..875012 (+) | Length | 185 a.a. |
| NCBI ID | WP_003110422.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain BAMCPA07-48 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 869455..880012
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6R75_RS04215 (A6R75_04215) | pilR | 870731..872068 (+) | 1338 | WP_003110427.1 | two-component system response regulator PilR | Regulator |
| A6R75_RS04220 (A6R75_04220) | thiO | 872114..873208 (-) | 1095 | WP_023092933.1 | glycine oxidase ThiO | - |
| A6R75_RS04225 (A6R75_04225) | - | 873343..873852 (+) | 510 | WP_023092934.1 | GspH/FimT family pseudopilin | - |
| A6R75_RS04230 (A6R75_04230) | - | 873958..874464 (+) | 507 | WP_003110423.1 | GspH/FimT family pseudopilin | - |
| A6R75_RS04235 (A6R75_04235) | pilV | 874455..875012 (+) | 558 | WP_003110422.1 | type 4a pilus minor pilin PilV | Machinery gene |
| A6R75_RS04240 (A6R75_04240) | pilW | 875009..875833 (+) | 825 | WP_023092935.1 | type 4a pilus minor pilin PilW | - |
| A6R75_RS04245 (A6R75_04245) | pilX | 875830..876417 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| A6R75_RS04250 (A6R75_04250) | pilY1 | 876429..879913 (+) | 3485 | Protein_855 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20072.23 Da Isoelectric Point: 7.9204
>NTDB_id=178971 A6R75_RS04235 WP_003110422.1 874455..875012(+) (pilV) [Pseudomonas aeruginosa strain BAMCPA07-48]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=178971 A6R75_RS04235 WP_003110422.1 874455..875012(+) (pilV) [Pseudomonas aeruginosa strain BAMCPA07-48]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.378 |
100 |
0.984 |