Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   AS891_RS17825 Genome accession   NZ_CP015375
Coordinates   3376810..3377961 (-) Length   383 a.a.
NCBI ID   WP_003245839.1    Uniprot ID   A0AAE2VB70
Organism   Bacillus subtilis subsp. subtilis strain KCTC 3135     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 3371810..3382961
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS891_RS17795 (AS891_17790) cwlQ 3371949..3372683 (+) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -
  AS891_RS17800 (AS891_17795) bhbI 3372938..3373336 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  AS891_RS17805 (AS891_17800) spxH 3373333..3374232 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  AS891_RS17815 (AS891_17810) - 3374546..3374713 (+) 168 WP_003244944.1 hypothetical protein -
  AS891_RS17820 (AS891_17815) pepF 3374751..3376580 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  AS891_RS17825 (AS891_17820) coiA 3376810..3377961 (-) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  AS891_RS22995 - 3378005..3378127 (+) 123 WP_003245684.1 hypothetical protein -
  AS891_RS17830 (AS891_17825) mecA 3378122..3378778 (-) 657 WP_003245194.1 adaptor protein MecA Regulator
  AS891_RS23000 - 3378745..3378885 (-) 141 WP_119122854.1 hypothetical protein -
  AS891_RS17835 (AS891_17830) yjbE 3379055..3379711 (+) 657 WP_003232944.1 TerC family protein -
  AS891_RS17840 (AS891_17835) spx 3379754..3380149 (-) 396 WP_003245483.1 transcriptional regulator Spx -
  AS891_RS17845 (AS891_17840) yjbC 3380330..3380908 (-) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  AS891_RS17850 (AS891_17845) yjbB 3381072..3382289 (-) 1218 WP_010886478.1 MFS transporter -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44755.85 Da        Isoelectric Point: 10.0034

>NTDB_id=178935 AS891_RS17825 WP_003245839.1 3376810..3377961(-) (coiA) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=178935 AS891_RS17825 WP_003245839.1 3376810..3377961(-) (coiA) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

97.389

0.974


Multiple sequence alignment