Detailed information NTG0178880

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AS891_RS02030
• Genome accession: NZ_CP015375
• Coordinates: 391955..393067 (-)
• Length: 370 a.a.
• NCBI ID: WP_003243515.1
• Uniprot ID: A0AAE2SM46
• Organism: Bacillus subtilis subsp. subtilis strain KCTC 3135
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 386955..398067

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AS891_RS02015 (AS891_02015)	gyrA	387045..389510 (-)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-
AS891_RS02020 (AS891_02020)	gyrB	389721..391637 (-)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
AS891_RS02025 (AS891_02025)	remB	391692..391937 (-)	246	WP_003219266.1	extracellular matrix regulator RemB	-
AS891_RS02030 (AS891_02030)	recF	391955..393067 (-)	1113	WP_003243515.1	DNA replication/repair protein RecF	Machinery gene
AS891_RS02035 (AS891_02035)	rlbA	393083..393298 (-)	216	WP_003226810.1	ribosome maturation protein RlbA	-
AS891_RS02040 (AS891_02040)	dnaN	393429..394565 (-)	1137	WP_003242509.1	DNA polymerase III subunit beta	-
AS891_RS02045 (AS891_02045)	dnaA	394754..396094 (-)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
AS891_RS02050 (AS891_02050)	rpmH	396721..396855 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
AS891_RS02055 (AS891_02055)	rnpA	397007..397357 (+)	351	WP_003242628.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=178880 AS891_RS02030 WP_003243515.1 391955..393067(-) (recF) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=178880 AS891_RS02030 WP_003243515.1 391955..393067(-) (recF) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
TTGTATATCCAGAACTTAGAACTGACATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATCGGACAGGTTTCTCCCGTCTACCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTGTAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTGACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	100	100	1