Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BT246_RS21580 Genome accession   NZ_CP015350
Coordinates   4229943..4230401 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain MYBT18246     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4224943..4235401
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BT246_RS21565 (BT246_45180) - 4225606..4225842 (+) 237 WP_000283738.1 hypothetical protein -
  BT246_RS21570 (BT246_45190) - 4226010..4228118 (-) 2109 WP_000421680.1 polyphosphate kinase -
  BT246_RS21575 (BT246_45200) - 4228227..4229801 (-) 1575 WP_065485071.1 Ppx/GppA family phosphatase -
  BT246_RS21580 (BT246_45210) kre 4229943..4230401 (+) 459 WP_000804864.1 YkyB family protein Regulator
  BT246_RS21585 (BT246_45220) - 4230433..4231095 (-) 663 WP_065485073.1 YkyA family protein -
  BT246_RS21590 - 4231709..4232361 (-) 653 Protein_4268 diguanylate cyclase domain-containing protein -
  BT246_RS21595 (BT246_45250) - 4232525..4232758 (+) 234 WP_000939446.1 SPP1 phage holin family protein -
  BT246_RS21600 (BT246_45260) - 4232790..4233290 (-) 501 WP_000708123.1 hypothetical protein -
  BT246_RS21605 (BT246_45270) - 4233702..4235243 (+) 1542 WP_023522937.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=178777 BT246_RS21580 WP_000804864.1 4229943..4230401(+) (kre) [Bacillus thuringiensis strain MYBT18246]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=178777 BT246_RS21580 WP_000804864.1 4229943..4230401(+) (kre) [Bacillus thuringiensis strain MYBT18246]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment