Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BT246_RS10650 | Genome accession | NZ_CP015350 |
| Coordinates | 2051755..2052042 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648324.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis strain MYBT18246 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2040207..2088881 | 2051755..2052042 | within | 0 |
Gene organization within MGE regions
Location: 2040207..2088881
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BT246_RS10585 (BT246_21870) | - | 2040207..2040413 (+) | 207 | WP_000113545.1 | alpha/beta-type small acid-soluble spore protein | - |
| BT246_RS10590 (BT246_21880) | - | 2040649..2041878 (+) | 1230 | WP_003270289.1 | MFS transporter | - |
| BT246_RS10595 (BT246_21890) | - | 2041932..2042546 (-) | 615 | WP_065483260.1 | LysE/ArgO family amino acid transporter | - |
| BT246_RS10600 (BT246_21900) | - | 2042665..2044107 (+) | 1443 | WP_065483263.1 | PLP-dependent aminotransferase family protein | - |
| BT246_RS10605 (BT246_21910) | - | 2044120..2044287 (+) | 168 | WP_000816389.1 | DUF3933 family protein | - |
| BT246_RS10610 (BT246_21920) | - | 2044400..2045365 (-) | 966 | WP_000686790.1 | patatin-like phospholipase family protein | - |
| BT246_RS10615 (BT246_21930) | - | 2045453..2045599 (-) | 147 | WP_000540425.1 | YjcZ family sporulation protein | - |
| BT246_RS10620 (BT246_21940) | - | 2045823..2046575 (+) | 753 | WP_001034827.1 | YwqG family protein | - |
| BT246_RS10625 (BT246_21950) | - | 2046726..2047820 (+) | 1095 | WP_065483266.1 | transglutaminase domain-containing protein | - |
| BT246_RS10630 (BT246_21960) | - | 2047928..2048125 (+) | 198 | WP_001048104.1 | DUF4083 domain-containing protein | - |
| BT246_RS10635 (BT246_21970) | - | 2048156..2048617 (+) | 462 | WP_023521733.1 | NUDIX hydrolase | - |
| BT246_RS10640 (BT246_21980) | nadE | 2048666..2049484 (-) | 819 | WP_000174891.1 | ammonia-dependent NAD(+) synthetase | - |
| BT246_RS10645 (BT246_21990) | - | 2049758..2051638 (+) | 1881 | WP_001025996.1 | FtsX-like permease family protein | - |
| BT246_RS10650 (BT246_22000) | abrB | 2051755..2052042 (+) | 288 | WP_000648324.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BT246_RS10655 (BT246_22010) | - | 2052318..2053265 (+) | 948 | WP_063547095.1 | serine protease | - |
| BT246_RS10660 (BT246_22020) | - | 2053304..2053612 (-) | 309 | WP_001259912.1 | ArsR/SmtB family transcription factor | - |
| BT246_RS10665 (BT246_22030) | - | 2053719..2054654 (+) | 936 | WP_023521736.1 | aldo/keto reductase | - |
| BT246_RS10670 (BT246_22040) | - | 2054702..2055877 (+) | 1176 | WP_001082498.1 | MFS transporter | - |
| BT246_RS10675 (BT246_22050) | - | 2056171..2056395 (-) | 225 | WP_000162602.1 | hypothetical protein | - |
| BT246_RS10680 (BT246_22060) | - | 2056480..2056827 (-) | 348 | WP_000426321.1 | DUF4257 domain-containing protein | - |
| BT246_RS10685 (BT246_22070) | - | 2057024..2057550 (+) | 527 | Protein_2054 | DinB family protein | - |
| BT246_RS10690 (BT246_22080) | rsgA | 2057733..2058782 (+) | 1050 | WP_023521738.1 | ribosome small subunit-dependent GTPase A | - |
| BT246_RS39675 | - | 2059086..2060024 (+) | 939 | Protein_2056 | cache domain-containing protein | - |
| BT246_RS39680 | - | 2060148..2060966 (+) | 819 | WP_409193969.1 | methyl-accepting chemotaxis protein | - |
| BT246_RS10700 (BT246_22100) | - | 2061164..2061469 (+) | 306 | WP_000539571.1 | hypothetical protein | - |
| BT246_RS10705 (BT246_22110) | - | 2061793..2062158 (+) | 366 | WP_000965068.1 | DUF3979 family protein | - |
| BT246_RS10710 (BT246_22120) | - | 2062193..2063233 (-) | 1041 | WP_000370211.1 | GerAB/ArcD/ProY family transporter | - |
| BT246_RS10715 (BT246_22130) | - | 2063475..2063918 (+) | 444 | WP_000536897.1 | Dps family protein | - |
| BT246_RS10720 (BT246_22140) | - | 2064316..2065512 (-) | 1197 | WP_065483273.1 | tyrosine-type recombinase/integrase | - |
| BT246_RS10725 (BT246_22150) | - | 2065591..2066139 (-) | 549 | WP_065483276.1 | helix-turn-helix domain-containing protein | - |
| BT246_RS10730 (BT246_22160) | - | 2066286..2066477 (+) | 192 | WP_065483279.1 | hypothetical protein | - |
| BT246_RS10735 (BT246_22170) | - | 2066596..2066865 (+) | 270 | WP_065483283.1 | hypothetical protein | - |
| BT246_RS10740 (BT246_22180) | - | 2066882..2067109 (+) | 228 | WP_065483286.1 | hypothetical protein | - |
| BT246_RS10745 (BT246_22190) | - | 2067198..2068022 (+) | 825 | WP_197389495.1 | bifunctional DNA primase/polymerase | - |
| BT246_RS10750 (BT246_22200) | - | 2068039..2069424 (+) | 1386 | WP_065483289.1 | VapE domain-containing protein | - |
| BT246_RS10755 (BT246_22210) | - | 2069812..2070219 (+) | 408 | WP_065483292.1 | DUF722 domain-containing protein | - |
| BT246_RS37495 (BT246_22220) | - | 2070270..2070446 (+) | 177 | WP_157686145.1 | hypothetical protein | - |
| BT246_RS10760 (BT246_22230) | - | 2070629..2071249 (+) | 621 | WP_065483295.1 | hypothetical protein | - |
| BT246_RS10765 (BT246_22240) | - | 2071377..2071862 (+) | 486 | WP_065483297.1 | terminase small subunit | - |
| BT246_RS10770 (BT246_22250) | - | 2071887..2072195 (+) | 309 | WP_065483300.1 | DUF722 domain-containing protein | - |
| BT246_RS10775 (BT246_22260) | fic | 2072272..2072874 (+) | 603 | WP_065483303.1 | protein adenylyltransferase Fic | - |
| BT246_RS10780 (BT246_22270) | - | 2073021..2073560 (+) | 540 | WP_065483306.1 | hypothetical protein | - |
| BT246_RS10785 (BT246_22280) | - | 2073812..2074267 (+) | 456 | WP_000488209.1 | DUF3939 domain-containing protein | - |
| BT246_RS10790 (BT246_22290) | - | 2074494..2075438 (+) | 945 | WP_000798316.1 | alpha/beta hydrolase | - |
| BT246_RS10795 (BT246_22300) | - | 2075483..2076484 (-) | 1002 | WP_000594040.1 | LLM class flavin-dependent oxidoreductase | - |
| BT246_RS10800 (BT246_22310) | - | 2076589..2076780 (-) | 192 | WP_000683367.1 | DUF3896 family protein | - |
| BT246_RS10805 (BT246_22320) | - | 2076959..2078422 (+) | 1464 | WP_023521742.1 | flavin monoamine oxidase family protein | - |
| BT246_RS10810 (BT246_22330) | - | 2078507..2079091 (+) | 585 | WP_016124471.1 | GNAT family N-acetyltransferase | - |
| BT246_RS10815 (BT246_22340) | - | 2079116..2080018 (-) | 903 | WP_000442793.1 | aldo/keto reductase | - |
| BT246_RS10820 (BT246_22350) | - | 2080183..2081133 (+) | 951 | WP_000613426.1 | CobW family GTP-binding protein | - |
| BT246_RS10825 (BT246_22360) | - | 2081245..2081715 (-) | 471 | WP_065483309.1 | GNAT family N-acetyltransferase | - |
| BT246_RS10830 (BT246_22370) | - | 2081854..2082804 (-) | 951 | WP_001126154.1 | metal ABC transporter substrate-binding protein | - |
| BT246_RS38245 (BT246_22380) | - | 2083070..2083219 (+) | 150 | WP_000540932.1 | hypothetical protein | - |
| BT246_RS10835 (BT246_22390) | - | 2083335..2083994 (+) | 660 | WP_001042732.1 | oxidoreductase | - |
| BT246_RS10840 (BT246_22400) | namA | 2084024..2085061 (-) | 1038 | WP_001086179.1 | NADPH dehydrogenase NamA | - |
| BT246_RS10845 (BT246_22410) | - | 2085195..2085647 (+) | 453 | WP_000283912.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| BT246_RS10850 (BT246_22420) | - | 2085655..2086659 (+) | 1005 | WP_003274183.1 | DUF2628 domain-containing protein | - |
| BT246_RS10855 (BT246_22430) | - | 2086744..2088405 (+) | 1662 | WP_000824273.1 | peptide ABC transporter substrate-binding protein | - |
| BT246_RS10860 (BT246_22440) | fosB | 2088465..2088881 (+) | 417 | WP_065483312.1 | FosBx1 family fosfomycin resistance bacillithiol transferase | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10587.32 Da Isoelectric Point: 4.8408
>NTDB_id=178769 BT246_RS10650 WP_000648324.1 2051755..2052042(+) (abrB) [Bacillus thuringiensis strain MYBT18246]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
Nucleotide
Download Length: 288 bp
>NTDB_id=178769 BT246_RS10650 WP_000648324.1 2051755..2052042(+) (abrB) [Bacillus thuringiensis strain MYBT18246]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAACAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAACAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
55.556 |
94.737 |
0.526 |