Detailed information NTG0178769

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: FORC54_RS04665
• Genome accession: NZ_CP019121
• Coordinates: 976069..977349 (+)
• Length: 426 a.a.
• NCBI ID: WP_038939457.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_054
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 971069..982349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC54_RS04650 (FORC54_0890)	-	971629..973416 (-)	1788	WP_039561943.1	sensor histidine kinase	-
FORC54_RS04655 (FORC54_0891)	tig	973968..975266 (+)	1299	WP_011078150.1	trigger factor	-
FORC54_RS04660 (FORC54_0892)	clpP	975372..975998 (+)	627	WP_038939456.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
FORC54_RS04665 (FORC54_0893)	clpX	976069..977349 (+)	1281	WP_038939457.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
FORC54_RS04670 (FORC54_0894)	lon	977468..979819 (+)	2352	WP_017420949.1	endopeptidase La	-
FORC54_RS04675 (FORC54_0895)	-	980013..980285 (+)	273	WP_013572181.1	HU family DNA-binding protein	-
FORC54_RS04680 (FORC54_0896)	ppiD	980462..982321 (+)	1860	WP_101958415.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 426 a.a.
• Molecular weight: 46586.10 Da
• Isoelectric Point: 4.5916

>NTDB_id=178769 FORC54_RS04665 WP_038939457.1 976069..977349(+) (clpX) [Vibrio vulnificus strain FORC_054]
MTDKSKESSSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKRESEALPTPREIRAHLDDYVI
GQDHAKKVLAVAVYNHYKRLRNGDTTSDGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDV
ENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTIASVPPQGGRKHPQQEFLQV
DTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKDESKTVGELFTQVEPEDLVKYGLIPEFIGRLPVTASLTELD
EEALIQILCQPKNALTKQYAALFELEGADLEFREDALKAIAKKAMERKTGARGLRSILEGVLLETMYELPSMDDVSKVVI
DESVINGESEPLLIYTNSESQAAGAE

Nucleotide

• Length: 1281 bp

>NTDB_id=178769 FORC54_RS04665 WP_038939457.1 976069..977349(+) (clpX) [Vibrio vulnificus strain FORC_054]
ATGACAGATAAAAGCAAAGAGAGTAGTAGCGGTAAGTTGCTTTACTGCTCTTTCTGCGGCAAAAGCCAGCACGAAGTTCG
CAAGCTAATCGCTGGTCCATCCGTTTACATCTGTGACGAATGTGTCGATTTATGTAACGACATCATCCGTGAAGAGATCA
AAGATGTGCTTCCAAAACGTGAATCTGAAGCGTTACCAACGCCTCGTGAAATCCGTGCACACCTTGATGACTATGTAATC
GGTCAGGACCATGCGAAAAAAGTGCTCGCGGTTGCGGTATATAACCACTACAAGCGTTTACGTAATGGTGACACAACGAG
TGATGGCGTGGAGCTAGGTAAGAGTAACATCTTGCTGATCGGCCCAACAGGTAGCGGTAAGACGTTGCTTGCTGAGACGC
TTGCGCGTTTCCTCGATGTACCGTTCACTATGGCAGATGCCACGACGCTAACAGAAGCGGGTTACGTGGGCGAAGATGTT
GAAAACATCATTCAAAAGTTGCTTCAGAAATGTGATTACGACGTAGCGAAAGCAGAGCGTGGTATTGTGTATATCGACGA
GATCGACAAGATTTCTCGTAAAGCAGAAAACCCATCGATTACTCGTGACGTTTCTGGTGAAGGCGTTCAACAAGCGCTGC
TTAAACTGGTTGAAGGTACGATTGCTTCTGTACCACCTCAAGGTGGTCGTAAGCATCCTCAGCAAGAGTTTTTGCAAGTG
GATACGTCAAAGATCCTCTTTATCTGTGGTGGTGCATTTGCCGGTCTAGATAAAGTGATCGAACAACGAGTTGCAACAGG
TACCGGCATTGGTTTTGGTGCGGAAGTCCGCTCTAAAGACGAAAGCAAAACGGTGGGCGAATTGTTCACTCAGGTAGAGC
CAGAAGATCTTGTGAAATATGGTTTGATTCCTGAGTTTATTGGTCGTCTTCCAGTGACCGCTTCGTTGACCGAGTTGGAT
GAAGAAGCATTAATTCAGATTCTTTGCCAACCAAAAAATGCGCTAACAAAGCAATATGCAGCACTGTTTGAGCTGGAAGG
TGCGGATCTTGAGTTCAGAGAAGATGCGCTAAAAGCGATCGCGAAAAAAGCGATGGAGCGTAAAACAGGCGCTCGTGGTT
TGCGTTCAATTTTGGAAGGCGTGTTGCTAGAAACCATGTATGAACTGCCATCGATGGACGACGTGAGCAAAGTTGTTATT
GATGAATCGGTGATTAATGGTGAATCAGAGCCGCTTTTGATTTACACCAACAGTGAGAGCCAAGCCGCTGGCGCTGAGTA
A

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (114-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (14-51)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (319-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.102	94.131	0.556
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.062	95.07	0.523