Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   SporoP37_RS07815 Genome accession   NZ_CP015349
Coordinates   1501476..1502426 (-) Length   316 a.a.
NCBI ID   WP_081243129.1    Uniprot ID   -
Organism   Sporosarcina sp. P37     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1496476..1507426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SporoP37_RS07790 (SporoP37_07800) - 1497076..1498278 (-) 1203 WP_099662693.1 MFS transporter -
  SporoP37_RS17280 - 1498415..1498567 (+) 153 WP_158233549.1 hypothetical protein -
  SporoP37_RS07800 (SporoP37_07810) - 1498790..1499752 (-) 963 WP_085430677.1 siderophore ABC transporter substrate-binding protein -
  SporoP37_RS07805 (SporoP37_07815) - 1499775..1500536 (-) 762 WP_085430678.1 ATP-binding cassette domain-containing protein -
  SporoP37_RS07810 (SporoP37_07820) - 1500533..1501483 (-) 951 WP_085430679.1 iron chelate uptake ABC transporter family permease subunit -
  SporoP37_RS07815 (SporoP37_07825) ceuB 1501476..1502426 (-) 951 WP_081243129.1 ABC transporter permease Machinery gene
  SporoP37_RS07820 (SporoP37_07830) - 1502724..1503584 (-) 861 WP_085430680.1 DUF6612 family protein -
  SporoP37_RS07825 (SporoP37_07835) hflX 1503853..1505121 (-) 1269 WP_081243131.1 GTPase HflX -
  SporoP37_RS07830 (SporoP37_07840) - 1505176..1505877 (-) 702 WP_158233550.1 VOC family protein -
  SporoP37_RS07835 (SporoP37_07845) - 1506061..1506528 (+) 468 WP_099662694.1 nucleoside deaminase -
  SporoP37_RS07840 (SporoP37_07850) nfsA 1506623..1507354 (+) 732 WP_081243134.1 oxygen-insensitive NADPH nitroreductase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34952.22 Da        Isoelectric Point: 10.2511

>NTDB_id=178725 SporoP37_RS07815 WP_081243129.1 1501476..1502426(-) (ceuB) [Sporosarcina sp. P37]
MKKRYLIPTVILLSLLSLFVGASRITPADLLDWRSEETEIFLISRVPRLVAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATKLGILVSMLIFTNATLLEKMAVSFTFALISTFLFMQILDRIKFKDAIFIPLVGLMFGNILSSISTFFAYKANVI
QNMSAWLQGDFSMIMKGRYELLYISIPVLIITYLYANRFTVAGMGEDFSKNLGLAYKRIVNTGLILVALITTTVVLTVGL
IPFLGLIIPNIVSIFKGDHLQKTLPHTALLGAIFLLICDILGRVIIFPYEISISLMVGVIGSGIFLYLLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=178725 SporoP37_RS07815 WP_081243129.1 1501476..1502426(-) (ceuB) [Sporosarcina sp. P37]
ATGAAGAAACGTTATTTAATTCCAACCGTTATTCTGCTCTCCCTCCTGTCGCTGTTTGTCGGTGCAAGCCGAATCACACC
AGCAGACTTATTGGATTGGCGTTCAGAAGAAACAGAGATTTTCTTAATTAGTCGGGTTCCCCGATTAGTCGCAATATTGC
TTGCTGGTGCAGGAATGAGTATTGCCGGGTTGATTATGCAGCAACTTAGCCGCAATAAATTTGTCTCCCCGACTACAGCA
GGTACATTAGACGCGACAAAGCTGGGAATTTTAGTGTCTATGTTAATTTTCACCAACGCAACATTATTGGAAAAAATGGC
CGTGTCATTTACATTTGCCTTGATCAGTACGTTTTTATTCATGCAAATCCTGGATCGTATTAAATTCAAAGATGCCATTT
TTATTCCGCTTGTTGGCTTAATGTTCGGGAATATTTTATCTTCCATATCTACGTTTTTTGCATATAAAGCAAACGTGATA
CAGAATATGTCGGCTTGGCTTCAAGGTGACTTTTCCATGATCATGAAAGGGCGGTATGAGCTTTTGTATATCAGTATACC
GGTACTGATTATTACATATTTATATGCAAATCGTTTTACTGTGGCGGGAATGGGCGAAGATTTCTCCAAGAACCTCGGAC
TCGCGTATAAGCGTATCGTCAATACCGGATTGATTTTAGTCGCATTGATAACGACAACCGTAGTGCTGACGGTAGGTCTG
ATTCCTTTCTTAGGATTAATCATCCCGAACATCGTATCGATCTTTAAAGGAGACCATTTGCAAAAGACGCTGCCGCATAC
CGCATTACTTGGCGCTATTTTCCTTCTCATCTGTGACATTCTGGGCAGGGTTATTATTTTCCCATACGAGATCTCGATCA
GTTTAATGGTCGGCGTAATCGGAAGCGGAATCTTCCTGTACCTGTTGTTTAGGAGGAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.077

99.051

0.516

Multiple sequence alignment