Detailed information NTG0178571

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BVL38_RS23565
• Genome accession: NZ_CP019071
• Coordinates: 4596006..4597031 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CRE1493
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4591006..4602031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVL38_RS23545 (BVL38_24065)	metJ	4592067..4592384 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
BVL38_RS23550 (BVL38_24070)	yiiX	4592568..4593176 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
BVL38_RS23555 (BVL38_24075)	rpmE	4593237..4593449 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
BVL38_RS23560 (BVL38_24080)	priA	4593652..4595850 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
BVL38_RS23565 (BVL38_24085)	cytR	4596006..4597031 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
BVL38_RS23570 (BVL38_24090)	ftsN	4597123..4598082 (+)	960	WP_000068828.1	cell division protein FtsN	-
BVL38_RS23575 (BVL38_24095)	hslV	4598175..4598705 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BVL38_RS23580 (BVL38_24100)	hslU	4598715..4600046 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
BVL38_RS23585 (BVL38_24105)	menA	4600113..4601039 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BVL38_RS23590 (BVL38_24110)	rraA	4601132..4601617 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BVL38_RS23595 (BVL38_24115)	zapB	4601702..4601947 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=178571 BVL38_RS23565 WP_000644904.1 4596006..4597031(+) (cytR) [Escherichia coli strain CRE1493]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=178571 BVL38_RS23565 WP_000644904.1 4596006..4597031(+) (cytR) [Escherichia coli strain CRE1493]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628