Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BTT_RS21195 Genome accession   NZ_CP015310
Coordinates   4149221..4149679 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis serovar morrisoni str. 4AA1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4144221..4154679
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTT_RS21180 (BTT_42600) - 4144892..4145128 (+) 237 WP_000283738.1 hypothetical protein -
  BTT_RS21185 - 4145289..4147396 (-) 2108 Protein_4136 polyphosphate kinase -
  BTT_RS21190 (BTT_42630) - 4147505..4149079 (-) 1575 WP_017763557.1 Ppx/GppA family phosphatase -
  BTT_RS21195 (BTT_42640) kre 4149221..4149679 (+) 459 WP_000804864.1 YkyB family protein Regulator
  BTT_RS21200 (BTT_42650) - 4149711..4150373 (-) 663 WP_000922470.1 YkyA family protein -
  BTT_RS21205 (BTT_42660) - 4150988..4151641 (-) 654 WP_000680815.1 diguanylate cyclase -
  BTT_RS21210 (BTT_42670) - 4151805..4152038 (+) 234 WP_000939448.1 SPP1 phage holin family protein -
  BTT_RS21215 (BTT_42680) - 4152071..4152571 (-) 501 WP_000708116.1 hypothetical protein -
  BTT_RS21220 (BTT_42690) - 4152975..4154273 (+) 1299 Protein_4143 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=178441 BTT_RS21195 WP_000804864.1 4149221..4149679(+) (kre) [Bacillus thuringiensis serovar morrisoni str. 4AA1]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=178441 BTT_RS21195 WP_000804864.1 4149221..4149679(+) (kre) [Bacillus thuringiensis serovar morrisoni str. 4AA1]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAGCGTTTGATTGCCGAAA
AAAAAGCAATTAAAGAAGGATTACACTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGGCCTGAAGCATTGAAAC
AAGAAAAAAAATTAAGTGAACCGGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment