Detailed information NTG0178432

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BVL39_RS05660
• Genome accession: NZ_CP019051
• Coordinates: 1142752..1143777 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CRE1540
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1137752..1148777

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVL39_RS05650 (BVL39_05690)	rpmE	1139983..1140195 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
BVL39_RS05655 (BVL39_05695)	priA	1140398..1142596 (+)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
BVL39_RS05660 (BVL39_05700)	cytR	1142752..1143777 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
BVL39_RS05665 (BVL39_05705)	ftsN	1143869..1144828 (+)	960	WP_000068834.1	cell division protein FtsN	-
BVL39_RS05670 (BVL39_05710)	hslV	1144921..1145451 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BVL39_RS05675 (BVL39_05715)	hslU	1145461..1146792 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
BVL39_RS05680 (BVL39_05720)	menA	1146859..1147785 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BVL39_RS05685 (BVL39_05725)	rraA	1147878..1148363 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BVL39_RS05690 (BVL39_05730)	zapB	1148448..1148693 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=178432 BVL39_RS05660 WP_000644904.1 1142752..1143777(+) (cytR) [Escherichia coli strain CRE1540]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=178432 BVL39_RS05660 WP_000644904.1 1142752..1143777(+) (cytR) [Escherichia coli strain CRE1540]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628