Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   V471_RS09245 Genome accession   NZ_CP015283
Coordinates   1977917..1978219 (-) Length   100 a.a.
NCBI ID   WP_045768898.1    Uniprot ID   A0AAX1YB66
Organism   Streptococcus salivarius strain ATCC 25975     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1972917..1983219
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V471_RS09235 (V471_09090) - 1973734..1974729 (-) 996 WP_084871430.1 SIR2 family protein -
  V471_RS09240 (V471_09095) - 1974763..1977753 (-) 2991 WP_084871431.1 type I restriction endonuclease subunit R -
  V471_RS09245 (V471_09100) HI0659 1977917..1978219 (-) 303 WP_045768898.1 helix-turn-helix domain-containing protein Machinery gene
  V471_RS09250 (V471_09105) - 1978221..1978574 (-) 354 WP_045768899.1 type II toxin-antitoxin system RelE/ParE family toxin -
  V471_RS09255 (V471_09110) - 1978811..1979575 (-) 765 WP_045768900.1 SDR family NAD(P)-dependent oxidoreductase -
  V471_RS09260 (V471_09115) - 1979607..1980764 (-) 1158 WP_045768901.1 Mbeg1-like protein -
  V471_RS09265 (V471_09120) - 1980874..1981500 (+) 627 WP_084871432.1 Pr6Pr family membrane protein -
  V471_RS09270 (V471_09125) - 1981538..1982379 (-) 842 Protein_1771 HAD family hydrolase -
  V471_RS09275 (V471_09130) - 1982531..1982920 (+) 390 WP_004182763.1 hypothetical protein -

Sequence

Protein


Download         Length: 100 a.a.        Molecular weight: 10979.96 Da        Isoelectric Point: 10.0576

>NTDB_id=178323 V471_RS09245 WP_045768898.1 1977917..1978219(-) (HI0659) [Streptococcus salivarius strain ATCC 25975]
MTLEKNPAIGSSWDDLQKTIFTKEEIAASELRVALMLEIIDARKKQGISQKKLEELSGVKQPVIARMEKGKTAPQLDTVL
KILASLGKTLAVVPLDSHVK

Nucleotide


Download         Length: 303 bp        

>NTDB_id=178323 V471_RS09245 WP_045768898.1 1977917..1978219(-) (HI0659) [Streptococcus salivarius strain ATCC 25975]
ATGACCCTAGAAAAGAATCCAGCAATTGGAAGTAGTTGGGATGATTTACAGAAAACTATTTTCACTAAAGAGGAAATTGC
GGCGAGTGAACTCCGTGTCGCACTGATGCTTGAGATTATTGATGCTCGTAAAAAACAAGGCATTTCCCAAAAGAAACTAG
AAGAGCTAAGTGGTGTCAAACAACCTGTTATCGCACGTATGGAGAAAGGAAAAACGGCACCTCAGTTAGATACGGTTCTT
AAAATACTGGCTAGTCTAGGAAAGACATTGGCAGTAGTCCCACTTGATTCACATGTGAAGTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

62.069

87

0.54

Multiple sequence alignment