Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   V471_RS08305 Genome accession   NZ_CP015283
Coordinates   1776551..1777363 (-) Length   270 a.a.
NCBI ID   WP_084871512.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 25975     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1771551..1782363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V471_RS08275 (V471_08160) - 1771750..1772514 (-) 765 WP_084871389.1 nucleoside phosphorylase -
  V471_RS08280 (V471_08165) - 1772519..1773385 (-) 867 WP_004182606.1 GNAT family N-acetyltransferase -
  V471_RS08285 (V471_08170) yidA 1773564..1774370 (+) 807 WP_084871390.1 sugar-phosphatase -
  V471_RS08290 (V471_08175) - 1774370..1775584 (+) 1215 WP_084871391.1 aminoacyltransferase -
  V471_RS08295 (V471_08180) - 1775686..1775961 (-) 276 Protein_1577 ISL3 family transposase -
  V471_RS08300 (V471_08185) - 1776133..1776492 (-) 360 WP_045769141.1 YbaN family protein -
  V471_RS08305 (V471_08190) vicX 1776551..1777363 (-) 813 WP_084871512.1 MBL fold metallo-hydrolase Regulator
  V471_RS08310 (V471_08195) vicK 1777369..1778709 (-) 1341 WP_013990681.1 cell wall metabolism sensor histidine kinase VicK Regulator
  V471_RS08315 (V471_08200) vicR 1778702..1779409 (-) 708 WP_002884978.1 response regulator YycF Regulator
  V471_RS08320 (V471_08205) - 1779695..1780462 (+) 768 WP_037611663.1 amino acid ABC transporter ATP-binding protein -
  V471_RS08325 (V471_08210) - 1780472..1781305 (+) 834 WP_084871393.1 transporter substrate-binding domain-containing protein -
  V471_RS08330 (V471_08215) - 1781323..1782021 (+) 699 WP_084871394.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30094.89 Da        Isoelectric Point: 5.1733

>NTDB_id=178318 V471_RS08305 WP_084871512.1 1776551..1777363(-) (vicX) [Streptococcus salivarius strain ATCC 25975]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNINELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=178318 V471_RS08305 WP_084871512.1 1776551..1777363(-) (vicX) [Streptococcus salivarius strain ATCC 25975]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTATTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGCG
ATTTGGATGCTATCTTAGTTACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAACGAGAAAACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTTGTCATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAAAATGCCGATGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATTG
GTAATAAAACTAAAAAAATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAATGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGACACAGCGACTCCACT
GACAGATATTTAA

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.866

99.259

0.763

Multiple sequence alignment