Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BE930_RS13715 | Genome accession | NZ_CP019029 |
| Coordinates | 2204779..2205219 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360914.1 | Uniprot ID | A0A0H2YVZ3 |
| Organism | Escherichia coli strain Ecol_881 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2199779..2210219
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE930_RS13690 (BE930_14000) | aroP | 2200777..2202150 (+) | 1374 | WP_000969915.1 | aromatic amino acid transporter AroP | - |
| BE930_RS13695 (BE930_14005) | ampE | 2202193..2203047 (-) | 855 | WP_000172019.1 | beta-lactamase regulator AmpE | - |
| BE930_RS13700 (BE930_14010) | ampD | 2203044..2203595 (-) | 552 | WP_022645179.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| BE930_RS13705 (BE930_14015) | nadC | 2203683..2204576 (+) | 894 | WP_001135167.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| BE930_RS13715 (BE930_14025) | pilA | 2204779..2205219 (+) | 441 | WP_000360914.1 | prepilin peptidase-dependent pilin | Machinery gene |
| BE930_RS13720 (BE930_14030) | pilB | 2205229..2206614 (+) | 1386 | WP_022645178.1 | type II secretion system protein GspE | Machinery gene |
| BE930_RS13725 (BE930_14035) | hofC | 2206604..2207806 (+) | 1203 | WP_022645177.1 | protein transport protein HofC | - |
| BE930_RS13730 (BE930_14040) | guaC | 2207841..2208884 (-) | 1044 | WP_001217337.1 | GMP reductase | - |
| BE930_RS29820 | - | 2209040..2209084 (-) | 45 | WP_120795372.1 | protein YacM | - |
| BE930_RS13735 (BE930_14045) | coaE | 2209109..2209729 (+) | 621 | WP_022645176.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15620.77 Da Isoelectric Point: 4.5237
>NTDB_id=178282 BE930_RS13715 WP_000360914.1 2204779..2205219(+) (pilA) [Escherichia coli strain Ecol_881]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLNTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLNTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=178282 BE930_RS13715 WP_000360914.1 2204779..2205219(+) (pilA) [Escherichia coli strain Ecol_881]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAAATACCTGCGACGGTGGCAGCAATGGCATTCCTTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACGCCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAAATACCTGCGACGGTGGCAGCAATGGCATTCCTTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACGCCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |