Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BTI679_RS20925 Genome accession   NZ_CP015257
Coordinates   4044865..4045323 (+) Length   152 a.a.
NCBI ID   WP_098110665.1    Uniprot ID   -
Organism   Bacillus wiedmannii strain Bt18679     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4039865..4050323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTI679_RS20910 (BTI679_42440) - 4040520..4040756 (+) 237 WP_048563234.1 hypothetical protein -
  BTI679_RS20915 (BTI679_42450) - 4040932..4043040 (-) 2109 WP_064474937.1 polyphosphate kinase -
  BTI679_RS20920 (BTI679_42460) ppx 4043148..4044695 (-) 1548 WP_242288668.1 exopolyphosphatase -
  BTI679_RS20925 (BTI679_42470) kre 4044865..4045323 (+) 459 WP_098110665.1 YkyB family protein Regulator
  BTI679_RS20930 (BTI679_42480) - 4045355..4046017 (-) 663 WP_088047237.1 YkyA family protein -
  BTI679_RS20935 (BTI679_42490) - 4046671..4047312 (-) 642 WP_088047236.1 diguanylate cyclase -
  BTI679_RS20940 (BTI679_42500) - 4047476..4047709 (+) 234 WP_076539911.1 SPP1 phage holin family protein -
  BTI679_RS20945 (BTI679_42510) - 4047741..4048241 (-) 501 WP_048563239.1 hypothetical protein -
  BTI679_RS20950 (BTI679_42520) - 4048666..4050207 (+) 1542 WP_088047235.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17717.47 Da        Isoelectric Point: 10.6793

>NTDB_id=178127 BTI679_RS20925 WP_098110665.1 4044865..4045323(+) (kre) [Bacillus wiedmannii strain Bt18679]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGPLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=178127 BTI679_RS20925 WP_098110665.1 4044865..4045323(+) (kre) [Bacillus wiedmannii strain Bt18679]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACGGCTTTAGAACGCTTAATTGCTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATTCCTCCTACCAAAGAAGATTTTCGAATCCTACCACATCTTGGTCCTCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTGTCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCACTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment