Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   BTI679_RS06320 Genome accession   NZ_CP015257
Coordinates   1216463..1218289 (+) Length   608 a.a.
NCBI ID   WP_064476811.1    Uniprot ID   -
Organism   Bacillus wiedmannii strain Bt18679     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1211463..1223289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTI679_RS06300 (BTI679_12650) - 1211771..1212445 (-) 675 WP_000362605.1 TerC family protein -
  BTI679_RS06305 (BTI679_12660) mecA 1212786..1213469 (+) 684 WP_000350712.1 adaptor protein MecA Regulator
  BTI679_RS06310 (BTI679_12670) - 1213542..1215086 (+) 1545 WP_000799207.1 cardiolipin synthase -
  BTI679_RS06315 (BTI679_12680) - 1215167..1216411 (+) 1245 WP_064476812.1 competence protein CoiA family protein -
  BTI679_RS06320 (BTI679_12690) pepF 1216463..1218289 (+) 1827 WP_064476811.1 oligoendopeptidase F Regulator
  BTI679_RS06325 (BTI679_12700) - 1218418..1218591 (-) 174 WP_098111212.1 hypothetical protein -
  BTI679_RS06330 (BTI679_12710) - 1218822..1219715 (-) 894 WP_064476810.1 ClpXP adapter SpxH family protein -
  BTI679_RS06335 (BTI679_12720) - 1219715..1220113 (-) 399 WP_000043382.1 hypothetical protein -
  BTI679_RS06340 (BTI679_12730) - 1220294..1220872 (-) 579 WP_064476809.1 CYTH domain-containing protein -
  BTI679_RS06345 (BTI679_12740) - 1221019..1221390 (+) 372 WP_001179996.1 hypothetical protein -
  BTI679_RS06350 (BTI679_12750) - 1221421..1222059 (+) 639 WP_064476808.1 GTP pyrophosphokinase family protein -
  BTI679_RS06355 (BTI679_12760) - 1222078..1222875 (+) 798 WP_000673190.1 NAD kinase -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70393.69 Da        Isoelectric Point: 4.6257

>NTDB_id=178116 BTI679_RS06320 WP_064476811.1 1216463..1218289(+) (pepF) [Bacillus wiedmannii strain Bt18679]
MSEQNTVKTLPDRKEIEESSTWRLEDIFQTDAEWEKEFQAIKELLPKLTEFKEKLGDSANNLLEALQYEDEISMRLGKLY
TYAHMRYDQDTTNSVYQALNDRATNLYSQVSSSTAYIVPEILSISEDTLQTFLTENRDLSVYEHALEEITRQRPHVLSEA
EEALLAEASEVMSASSNTFGMLNNADLKFPSIKGEDGEEVEITHGRYIQFLESDDRRVREDAFKAVYETYGKYKNTFAST
LSGAVKRNNFNARVRKYDSARQAALSNNNIPEAVYDQLVESVHDNLHLLHRYIDIRKRALGLDELHMYDLYTPLVPEVKM
NVKYEEAQDMLLKSLNVLGDEYVDILKEAYENRWVDVYENKGKRSGAYSSGAYGTNPYILMNWHDNVNNLYTLAHEFGHS
VHSYYTRKTQPHVYGDYSIFVAEVASTCNEALLNDYLLKTTEDKKERLYLLNHYLEGFRGTVFRQTMFAEFEHIIHKKVQ
EGHAVTPDMLTEIYYDLNKKYFGDALVIDEEIGLEWSRIPHFYYNYYVYQYATGFSAATALSKQILEEGQPAVERYINEF
LKAGSSDYPIEVLKKAGVDMASPEPVKEALQVFEEKLNELEALLFEEK

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=178116 BTI679_RS06320 WP_064476811.1 1216463..1218289(+) (pepF) [Bacillus wiedmannii strain Bt18679]
ATGTCTGAACAAAACACAGTAAAAACATTACCAGATCGCAAAGAAATTGAAGAATCAAGTACGTGGCGATTAGAAGATAT
TTTCCAAACAGATGCAGAATGGGAAAAAGAATTCCAAGCTATTAAAGAGCTATTACCGAAGTTAACTGAATTTAAAGAGA
AACTTGGTGACTCTGCGAACAATTTACTTGAAGCATTGCAATATGAAGACGAAATTTCAATGCGATTAGGTAAGCTATAT
ACATATGCACATATGCGTTACGATCAAGATACAACAAACTCTGTGTATCAAGCGTTAAATGACCGCGCAACAAATTTATA
TTCACAAGTATCTAGTAGCACAGCATATATTGTGCCTGAAATTTTATCGATTTCAGAAGATACACTGCAAACATTCTTGA
CAGAAAATAGAGACTTAAGTGTATATGAACATGCATTAGAAGAAATTACGCGTCAACGCCCGCACGTATTATCTGAAGCG
GAAGAGGCTCTATTAGCAGAAGCATCTGAAGTAATGAGTGCGTCAAGTAATACATTTGGTATGTTGAATAATGCGGATTT
GAAATTCCCATCTATTAAAGGTGAGGATGGAGAAGAAGTGGAAATTACACATGGTCGTTACATTCAGTTTTTAGAAAGTG
ATGATCGTCGTGTGCGCGAAGATGCATTCAAAGCTGTATATGAAACGTACGGAAAATATAAGAACACATTTGCAAGTACG
TTAAGCGGAGCTGTGAAACGTAATAATTTCAATGCGCGTGTTCGTAAATACGATTCTGCACGTCAAGCGGCATTAAGTAA
TAATAATATTCCTGAAGCGGTATATGATCAACTTGTTGAATCTGTACATGATAATTTACACTTGCTACATCGTTACATTG
ATATTCGTAAGCGTGCACTAGGACTTGATGAGCTTCATATGTATGATTTATATACACCACTTGTACCAGAAGTGAAAATG
AACGTGAAGTATGAAGAAGCACAAGACATGTTATTAAAGTCTTTAAATGTACTTGGTGATGAGTATGTTGACATTTTAAA
AGAAGCATATGAAAATCGCTGGGTAGATGTGTATGAGAATAAAGGAAAGCGAAGCGGAGCATATTCATCTGGTGCATATG
GAACAAATCCGTATATTTTAATGAACTGGCATGATAATGTAAATAATTTATATACACTTGCTCATGAGTTCGGTCATTCC
GTGCATAGTTACTATACAAGAAAGACGCAGCCGCACGTATACGGTGATTATTCAATCTTCGTTGCGGAAGTAGCATCAAC
TTGTAATGAAGCACTTCTAAACGATTATTTATTAAAAACGACAGAAGATAAGAAAGAGCGTCTATACTTATTAAATCATT
ATTTAGAAGGATTCCGTGGTACTGTATTCCGTCAAACGATGTTCGCAGAGTTTGAGCATATTATTCATAAGAAAGTACAA
GAAGGACATGCGGTTACGCCAGACATGTTAACGGAGATCTACTATGATTTAAATAAGAAATATTTCGGTGATGCTTTAGT
AATCGATGAAGAAATTGGTTTAGAGTGGTCTCGTATTCCGCACTTCTACTACAACTATTACGTATACCAATACGCAACAG
GATTTAGTGCAGCAACGGCTTTATCTAAACAAATTTTAGAAGAGGGGCAACCAGCAGTAGAACGTTACATTAATGAGTTC
TTAAAAGCAGGAAGCTCAGATTATCCAATTGAAGTGCTGAAAAAAGCTGGAGTAGATATGGCATCTCCAGAACCGGTAAA
AGAAGCGCTACAAGTATTTGAAGAGAAATTAAATGAATTAGAAGCATTATTATTTGAAGAGAAGTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(211-591)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.747

97.533

0.485

Multiple sequence alignment