Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BTI247_RS20725 Genome accession   NZ_CP015250
Coordinates   4113169..4113627 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis Bt18247     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4108169..4118627
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTI247_RS20710 (BTI247_42600) - 4108840..4109076 (+) 237 WP_000283738.1 hypothetical protein -
  BTI247_RS20715 (BTI247_42610) - 4109237..4111345 (-) 2109 WP_069356141.1 polyphosphate kinase -
  BTI247_RS20720 (BTI247_42620) ppx 4111454..4113028 (-) 1575 WP_069356142.1 exopolyphosphatase -
  BTI247_RS20725 (BTI247_42630) kre 4113169..4113627 (+) 459 WP_000804864.1 YkyB family protein Regulator
  BTI247_RS20730 (BTI247_42640) - 4113659..4114321 (-) 663 WP_053563728.1 YkyA family protein -
  BTI247_RS20735 (BTI247_42650) - 4114935..4115588 (-) 654 WP_053563727.1 diguanylate cyclase -
  BTI247_RS20740 (BTI247_42660) - 4115752..4115985 (+) 234 WP_000939446.1 SPP1 phage holin family protein -
  BTI247_RS20745 (BTI247_42670) - 4116017..4116517 (-) 501 WP_053563726.1 hypothetical protein -
  BTI247_RS20750 (BTI247_42680) - 4116929..4118470 (+) 1542 WP_053563725.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=178080 BTI247_RS20725 WP_000804864.1 4113169..4113627(+) (kre) [Bacillus thuringiensis Bt18247]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=178080 BTI247_RS20725 WP_000804864.1 4113169..4113627(+) (kre) [Bacillus thuringiensis Bt18247]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment