Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   A4265_RS08275 Genome accession   NZ_CP015238
Coordinates   1663084..1663797 (+) Length   237 a.a.
NCBI ID   WP_032464617.1    Uniprot ID   A0A9X8T0Q6
Organism   Streptococcus pyogenes strain NS53     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1658084..1668797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A4265_RS08265 (A4265_07855) treC 1659154..1660782 (-) 1629 WP_053308668.1 alpha,alpha-phosphotrehalase -
  A4265_RS08270 (A4265_07860) treP 1660849..1662873 (-) 2025 WP_063632175.1 PTS system trehalose-specific EIIBC component -
  A4265_RS08275 (A4265_07865) treR 1663084..1663797 (+) 714 WP_032464617.1 trehalose operon repressor Regulator
  A4265_RS08285 (A4265_07870) - 1664076..1664413 (-) 338 Protein_1553 winged helix-turn-helix transcriptional regulator -
  A4265_RS08290 (A4265_07875) - 1664600..1665457 (+) 858 WP_009881025.1 VOC family protein -
  A4265_RS08295 (A4265_07880) yaaA 1665499..1666230 (+) 732 WP_012561068.1 peroxide stress protein YaaA -
  A4265_RS08300 (A4265_07885) nrdG 1666404..1667018 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  A4265_RS08305 (A4265_07890) - 1667033..1667527 (-) 495 WP_063632176.1 GNAT family N-acetyltransferase -
  A4265_RS08310 (A4265_07895) - 1667536..1668471 (-) 936 WP_063632177.1 Gfo/Idh/MocA family protein -
  A4265_RS09040 - 1668500..1668646 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27661.89 Da        Isoelectric Point: 9.7425

>NTDB_id=177921 A4265_RS08275 WP_032464617.1 1663084..1663797(+) (treR) [Streptococcus pyogenes strain NS53]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFRKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=177921 A4265_RS08275 WP_032464617.1 1663084..1663797(+) (treR) [Streptococcus pyogenes strain NS53]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTCGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCTCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment