Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   A4265_RS06755 Genome accession   NZ_CP015238
Coordinates   1340892..1341617 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain NS53     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1335892..1346617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A4265_RS06720 (A4265_06370) rnpM 1335926..1336222 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  A4265_RS06725 (A4265_06375) nusA 1336238..1337395 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  A4265_RS06730 (A4265_06380) rimP 1337570..1338106 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  A4265_RS06740 (A4265_06390) trmB 1338365..1339000 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  A4265_RS06745 (A4265_06395) ccrZ 1339000..1339791 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  A4265_RS06750 (A4265_06400) - 1339855..1340889 (-) 1035 WP_010922583.1 ABC transporter permease -
  A4265_RS06755 (A4265_06405) pptA 1340892..1341617 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  A4265_RS06760 (A4265_06410) - 1341689..1342108 (+) 420 WP_002983376.1 HIT family protein -
  A4265_RS06765 (A4265_06415) - 1342105..1342461 (+) 357 WP_032464516.1 hypothetical protein -
  A4265_RS06770 (A4265_06420) brpA 1342572..1343855 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  A4265_RS06775 (A4265_06425) - 1343864..1344388 (-) 525 WP_020905405.1 GNAT family N-acetyltransferase -
  A4265_RS06780 (A4265_06430) tsaE 1344363..1344824 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  A4265_RS06785 (A4265_06435) - 1344978..1346438 (-) 1461 WP_063632082.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=177915 A4265_RS06755 WP_002983379.1 1340892..1341617(-) (pptA) [Streptococcus pyogenes strain NS53]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=177915 A4265_RS06755 WP_002983379.1 1340892..1341617(-) (pptA) [Streptococcus pyogenes strain NS53]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment