Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | AZK53_RS15480 | Genome accession | NZ_CP015226 |
| Coordinates | 3110931..3111353 (+) | Length | 140 a.a. |
| NCBI ID | WP_013057949.1 | Uniprot ID | A0A8D3X0F8 |
| Organism | Priestia megaterium strain IHB B 7164 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 3105931..3116353
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZK53_RS15455 (AZK53_15455) | - | 3106261..3107094 (-) | 834 | WP_029322901.1 | AraC family transcriptional regulator | - |
| AZK53_RS15460 (AZK53_15460) | - | 3107319..3108140 (+) | 822 | WP_029322903.1 | sensor histidine kinase | - |
| AZK53_RS15465 (AZK53_15465) | - | 3108141..3108782 (+) | 642 | WP_057273553.1 | response regulator transcription factor | - |
| AZK53_RS15470 (AZK53_15470) | - | 3108914..3110296 (+) | 1383 | WP_029322909.1 | PepSY domain-containing protein | - |
| AZK53_RS15475 (AZK53_15475) | - | 3110326..3110790 (+) | 465 | WP_029322913.1 | FixH family protein | - |
| AZK53_RS15480 (AZK53_15480) | nucA/comI | 3110931..3111353 (+) | 423 | WP_013057949.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| AZK53_RS15485 (AZK53_15485) | - | 3111507..3111860 (+) | 354 | WP_223272376.1 | DUF1516 family protein | - |
| AZK53_RS15490 (AZK53_15490) | - | 3111901..3112494 (-) | 594 | WP_013057951.1 | hypothetical protein | - |
| AZK53_RS15495 (AZK53_15495) | - | 3112650..3113306 (-) | 657 | WP_029322917.1 | TetR/AcrR family transcriptional regulator | - |
| AZK53_RS15500 (AZK53_15500) | - | 3113330..3114610 (-) | 1281 | WP_228540830.1 | glycosyltransferase | - |
| AZK53_RS15505 (AZK53_15505) | - | 3114908..3115453 (+) | 546 | WP_064471863.1 | GNAT family N-acetyltransferase | - |
| AZK53_RS15510 (AZK53_15510) | - | 3115753..3116238 (-) | 486 | WP_029322922.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 140 a.a. Molecular weight: 15329.17 Da Isoelectric Point: 4.4990
>NTDB_id=177760 AZK53_RS15480 WP_013057949.1 3110931..3111353(+) (nucA/comI) [Priestia megaterium strain IHB B 7164]
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGSGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGSGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
Nucleotide
Download Length: 423 bp
>NTDB_id=177760 AZK53_RS15480 WP_013057949.1 3110931..3111353(+) (nucA/comI) [Priestia megaterium strain IHB B 7164]
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATCGACCGAGACGGGGCTGAGGAAAACCGCCGTGAGTCTTTAAAA
GGCATTCCGACTAAAAGCGGCTATGACCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAGCGGTGCCGATAT
TGAATATGTAAAGCCTTCAGACAATCGAGGCGCCGGGTCTTGGATCTCACATCAAGTAGACGAGTTTCCTGACGGTACGA
AGGTTTTAATTGAAGTGAAGTAA
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATCGACCGAGACGGGGCTGAGGAAAACCGCCGTGAGTCTTTAAAA
GGCATTCCGACTAAAAGCGGCTATGACCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAGCGGTGCCGATAT
TGAATATGTAAAGCCTTCAGACAATCGAGGCGCCGGGTCTTGGATCTCACATCAAGTAGACGAGTTTCCTGACGGTACGA
AGGTTTTAATTGAAGTGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
61.207 |
82.857 |
0.507 |