Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   A4A60_RS06510 Genome accession   NZ_CP015222
Coordinates   1273626..1273817 (+) Length   63 a.a.
NCBI ID   WP_046380930.1    Uniprot ID   A0AA96V089
Organism   Bacillus subtilis strain HRBS-10TDI13     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1268626..1278817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A4A60_RS06485 (A4A60_06495) yjzC 1270534..1270713 (+) 180 WP_003245356.1 YjzC family protein -
  A4A60_RS06490 (A4A60_06500) yjzD 1270760..1270945 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  A4A60_RS06495 (A4A60_06505) - 1271194..1271928 (+) 735 WP_014479433.1 hypothetical protein -
  A4A60_RS06500 (A4A60_06510) - 1272010..1272567 (+) 558 WP_014479435.1 hypothetical protein -
  A4A60_RS06505 (A4A60_06515) med 1272658..1273611 (+) 954 WP_069837427.1 transcriptional regulator Med Regulator
  A4A60_RS06510 (A4A60_06520) comZ 1273626..1273817 (+) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  A4A60_RS06515 (A4A60_06525) yjzB 1273847..1274086 (-) 240 WP_003232972.1 spore coat protein YjzB -
  A4A60_RS06520 (A4A60_06530) fabH 1274251..1275189 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  A4A60_RS06525 (A4A60_06535) fabF 1275212..1276453 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  A4A60_RS06530 (A4A60_06540) yjaZ 1276529..1277314 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  A4A60_RS06535 (A4A60_06545) appD 1277505..1278491 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7282.31 Da        Isoelectric Point: 4.2564

>NTDB_id=177637 A4A60_RS06510 WP_046380930.1 1273626..1273817(+) (comZ) [Bacillus subtilis strain HRBS-10TDI13]
MQHEKSLEFLQIAMKYFPEAKEQFEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=177637 A4A60_RS06510 WP_046380930.1 1273626..1273817(+) (comZ) [Bacillus subtilis strain HRBS-10TDI13]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGTTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

96.825

100

0.968

Multiple sequence alignment