Detailed information NTG0177637

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BE932_RS18540
• Genome accession: NZ_CP018991
• Coordinates: 3155245..3156270 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain Ecol_AZ146
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3150245..3161270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BE932_RS18510 (BE932_19055)	zapB	3150329..3150574 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
BE932_RS18515 (BE932_19060)	rraA	3150659..3151144 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BE932_RS18520 (BE932_19065)	menA	3151237..3152163 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BE932_RS18525 (BE932_19070)	hslU	3152230..3153561 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
BE932_RS18530 (BE932_19075)	hslV	3153571..3154101 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BE932_RS18535 (BE932_19080)	ftsN	3154194..3155153 (-)	960	WP_000068834.1	cell division protein FtsN	-
BE932_RS18540 (BE932_19085)	cytR	3155245..3156270 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
BE932_RS18545 (BE932_19090)	priA	3156426..3158624 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
BE932_RS18550 (BE932_19095)	rpmE	3158827..3159039 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
BE932_RS18555 (BE932_19100)	yiiX	3159100..3159708 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
BE932_RS18560 (BE932_19105)	metJ	3159768..3160085 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=177637 BE932_RS18540 WP_000644908.1 3155245..3156270(-) (cytR) [Escherichia coli strain Ecol_AZ146]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=177637 BE932_RS18540 WP_000644908.1 3155245..3156270(-) (cytR) [Escherichia coli strain Ecol_AZ146]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625