Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   A4A60_RS04865 Genome accession   NZ_CP015222
Coordinates   969212..970006 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain HRBS-10TDI13     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 964212..975006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A4A60_RS04835 (A4A60_04840) sxzA 965051..966082 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  A4A60_RS04840 (A4A60_04845) yfhB 966197..967078 (+) 882 WP_069837383.1 PhzF family phenazine biosynthesis isomerase -
  A4A60_RS04845 (A4A60_04850) yfhC 967166..967750 (+) 585 WP_032723010.1 nitroreductase -
  A4A60_RS04850 (A4A60_04855) yfhD 967789..967980 (-) 192 WP_003233561.1 YfhD family protein -
  A4A60_RS04855 (A4A60_04860) yfhE 968047..968157 (-) 111 WP_003223230.1 YfhE family protein -
  A4A60_RS04860 (A4A60_04865) yfhF 968212..969123 (-) 912 WP_041332787.1 TIGR01777 family oxidoreductase -
  A4A60_RS04865 (A4A60_04870) recX 969212..970006 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  A4A60_RS04870 (A4A60_04875) yfhH 970008..970322 (+) 315 WP_003244592.1 YfhH family protein -
  A4A60_RS04880 (A4A60_04885) yfhI 970465..971658 (+) 1194 WP_003243500.1 MFS transporter -
  A4A60_RS04885 (A4A60_04890) sspK 971690..971842 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  A4A60_RS04890 (A4A60_04895) yfhJ 971967..972236 (+) 270 WP_003243789.1 YfhJ family protein -
  A4A60_RS04895 (A4A60_04900) yfhK 972381..972899 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  A4A60_RS04900 (A4A60_04905) spdL 972984..973316 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  A4A60_RS04905 (A4A60_04910) ephM 973303..974163 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=177629 A4A60_RS04865 WP_014479217.1 969212..970006(+) (recX) [Bacillus subtilis strain HRBS-10TDI13]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=177629 A4A60_RS04865 WP_014479217.1 969212..970006(+) (recX) [Bacillus subtilis strain HRBS-10TDI13]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment