Detailed information NTG0177619

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: A4A60_RS00250
• Genome accession: NZ_CP015222
• Coordinates: 46164..46454 (-)
• Length: 96 a.a.
• NCBI ID: WP_003226760.1
• Uniprot ID: A0A7G9PCZ4
• Organism: Bacillus subtilis strain HRBS-10TDI13
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	44889..46127	46164..46454	flank	37

Gene organization within MGE regions

Location: 44889..46454

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4A60_RS00250 (A4A60_00250)	abrB	46164..46454 (-)	291	WP_003226760.1	transition state genes transcriptional regulator AbrB	Regulator

Sequence

Protein

• Length: 96 a.a.
• Molecular weight: 10772.62 Da
• Isoelectric Point: 6.3482

>NTDB_id=177619 A4A60_RS00250 WP_003226760.1 46164..46454(-) (abrB) [Bacillus subtilis strain HRBS-10TDI13]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK

Nucleotide

• Length: 291 bp

>NTDB_id=177619 A4A60_RS00250 WP_003226760.1 46164..46454(-) (abrB) [Bacillus subtilis strain HRBS-10TDI13]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (55-90)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (10-52)

3D structure

• AlphaFold DB: A0A7G9PCZ4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	100	100	1