Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   CJJRM1285_RS06825 Genome accession   NZ_CP015209
Coordinates   1313565..1314533 (+) Length   322 a.a.
NCBI ID   WP_002893972.1    Uniprot ID   A0A3H8JWJ4
Organism   Campylobacter jejuni subsp. jejuni strain RM1285     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1308565..1319533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJJRM1285_RS06800 (CjjRM1285_1343) cdsA 1309472..1310197 (-) 726 WP_002856027.1 phosphatidate cytidylyltransferase -
  CJJRM1285_RS06805 (CjjRM1285_1344) - 1310206..1310544 (-) 339 WP_002855905.1 hypothetical protein -
  CJJRM1285_RS06810 (CjjRM1285_1345) - 1310546..1311853 (-) 1308 WP_002856257.1 NFACT RNA binding domain-containing protein -
  CJJRM1285_RS06815 (CjjRM1285_1346) mobA 1311915..1312490 (+) 576 WP_002855734.1 molybdenum cofactor guanylyltransferase -
  CJJRM1285_RS06820 (CjjRM1285_1347) pldA 1312487..1313476 (+) 990 WP_002855844.1 phospholipase A -
  CJJRM1285_RS06825 (CjjRM1285_1348) ceuB 1313565..1314533 (+) 969 WP_002893972.1 ABC transporter permease Machinery gene
  CJJRM1285_RS06830 (CjjRM1285_1349) ceuC 1314526..1315464 (+) 939 WP_002856142.1 iron chelate uptake ABC transporter family permease subunit -
  CJJRM1285_RS06835 (CjjRM1285_1350) ceuD 1315461..1316216 (+) 756 WP_002856278.1 ABC transporter ATP-binding protein -
  CJJRM1285_RS06840 (CjjRM1285_1351) ceuB 1316229..1317221 (+) 993 WP_052822605.1 enterochelin ABC transporter substrate-binding protein CeuB -
  CJJRM1285_RS06845 (CjjRM1285_1352) - 1317375..1317596 (+) 222 WP_002856036.1 hypothetical protein -
  CJJRM1285_RS06850 (CjjRM1285_1353) - 1317597..1317878 (+) 282 WP_002856297.1 type II toxin-antitoxin system RelE/ParE family toxin -
  CJJRM1285_RS06860 (CjjRM1285_1355) - 1318238..1318792 (-) 555 WP_002855904.1 membrane protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35425.35 Da        Isoelectric Point: 9.6678

>NTDB_id=177582 CJJRM1285_RS06825 WP_002893972.1 1313565..1314533(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain RM1285]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=177582 CJJRM1285_RS06825 WP_002893972.1 1313565..1314533(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain RM1285]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACGGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGGACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACCCAAGCTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTTTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3H8JWJ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.689

100

0.997


Multiple sequence alignment