Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CJJRM1285_RS05555 | Genome accession | NZ_CP015209 |
| Coordinates | 1059397..1059699 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni subsp. jejuni strain RM1285 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1054397..1064699
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJJRM1285_RS05530 (CjjRM1285_1089) | rpsR | 1054759..1055019 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CJJRM1285_RS05535 (CjjRM1285_1090) | lon | 1055080..1057455 (-) | 2376 | WP_002856101.1 | endopeptidase La | - |
| CJJRM1285_RS05540 (CjjRM1285_1091) | - | 1057472..1058119 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| CJJRM1285_RS05545 (CjjRM1285_1092) | fliW | 1058280..1058669 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CJJRM1285_RS05550 (CjjRM1285_1093) | proC | 1058669..1059400 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CJJRM1285_RS05555 (CjjRM1285_1094) | ctsT | 1059397..1059699 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| CJJRM1285_RS05560 (CjjRM1285_1095) | - | 1059696..1060358 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| CJJRM1285_RS05565 (CjjRM1285_1096) | - | 1060355..1060807 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| CJJRM1285_RS05570 (CjjRM1285_1097) | hemD | 1060804..1061433 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| CJJRM1285_RS05575 (CjjRM1285_1098) | thiE | 1061411..1062043 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| CJJRM1285_RS05580 (CjjRM1285_1099) | thiD | 1062033..1062845 (-) | 813 | WP_002856188.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CJJRM1285_RS05585 (CjjRM1285_1100) | - | 1062842..1063528 (-) | 687 | WP_057036290.1 | endonuclease III domain-containing protein | - |
| CJJRM1285_RS05590 (CjjRM1285_1101) | - | 1063525..1064286 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=177575 CJJRM1285_RS05555 WP_002855822.1 1059397..1059699(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain RM1285]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=177575 CJJRM1285_RS05555 WP_002855822.1 1059397..1059699(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain RM1285]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |