Detailed information NTG0177563

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BE928_RS20995
• Genome accession: NZ_CP018983
• Coordinates: 3878271..3879296 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain Ecol_867
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3873271..3884296

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BE928_RS20965 (BE928_21455)	zapB	3873355..3873600 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
BE928_RS20970 (BE928_21460)	rraA	3873685..3874170 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BE928_RS20975 (BE928_21465)	menA	3874263..3875189 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BE928_RS20980 (BE928_21470)	hslU	3875256..3876587 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
BE928_RS20985 (BE928_21475)	hslV	3876597..3877127 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BE928_RS20990 (BE928_21480)	ftsN	3877220..3878179 (-)	960	WP_000068834.1	cell division protein FtsN	-
BE928_RS20995 (BE928_21485)	cytR	3878271..3879296 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
BE928_RS21000 (BE928_21490)	priA	3879452..3881650 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
BE928_RS21005 (BE928_21495)	rpmE	3881853..3882065 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
BE928_RS21010 (BE928_21500)	yiiX	3882126..3882734 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
BE928_RS21015 (BE928_21505)	metJ	3882794..3883111 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=177563 BE928_RS20995 WP_000644908.1 3878271..3879296(-) (cytR) [Escherichia coli strain Ecol_867]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=177563 BE928_RS20995 WP_000644908.1 3878271..3879296(-) (cytR) [Escherichia coli strain Ecol_867]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625