Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   SporoP8_RS07620 Genome accession   NZ_CP015207
Coordinates   1540154..1541104 (-) Length   316 a.a.
NCBI ID   WP_085131954.1    Uniprot ID   A0A2G5WWV8
Organism   Sporosarcina ureae strain P8     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1535154..1546104
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SporoP8_RS07600 (SporoP8_07540) - 1535851..1536993 (-) 1143 WP_198166116.1 MFS transporter -
  SporoP8_RS07605 (SporoP8_07545) - 1537457..1538419 (-) 963 WP_085131951.1 siderophore ABC transporter substrate-binding protein -
  SporoP8_RS07610 (SporoP8_07550) - 1538453..1539214 (-) 762 WP_085131952.1 ABC transporter ATP-binding protein -
  SporoP8_RS07615 (SporoP8_07555) - 1539211..1540161 (-) 951 WP_085131953.1 iron chelate uptake ABC transporter family permease subunit -
  SporoP8_RS07620 (SporoP8_07560) ceuB 1540154..1541104 (-) 951 WP_085131954.1 ABC transporter permease Machinery gene
  SporoP8_RS07625 (SporoP8_07565) - 1541336..1542184 (-) 849 WP_085131955.1 DUF6612 family protein -
  SporoP8_RS07630 (SporoP8_07570) hflX 1542466..1543734 (-) 1269 WP_085131956.1 GTPase HflX -
  SporoP8_RS07635 (SporoP8_07575) - 1543786..1544490 (-) 705 WP_085131957.1 VOC family protein -
  SporoP8_RS07640 (SporoP8_07580) nfsA 1544691..1545422 (+) 732 WP_085131958.1 oxygen-insensitive NADPH nitroreductase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34697.98 Da        Isoelectric Point: 10.2133

>NTDB_id=177534 SporoP8_RS07620 WP_085131954.1 1540154..1541104(-) (ceuB) [Sporosarcina ureae strain P8]
MKKRYLITAVILLSFLSLFVGASRITPADLLDWRSEATEIFLISRVPRLVAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATKLGILVSMLIFTNATLLEKMAVSFTFALLGTFLFMQILDRIKFKDAIFIPLVGLMFGNILSSIATFFAYKANVI
QNMSAWLQGDFSMIMKGRYELLYISIPVLIITYLYANRFTVAGMGEDFSKNLGLAYKSIVNIGLILVALITTTVVLTVGL
IPFLGLIIPNIVSIFKGDHLQKTLPHTALLGAIFLLICDILGRVIIFPYEISISLMVGVIGSAIFLFLLFRGKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=177534 SporoP8_RS07620 WP_085131954.1 1540154..1541104(-) (ceuB) [Sporosarcina ureae strain P8]
ATGAAGAAACGTTACTTAATTACAGCAGTTATACTTTTATCATTTCTTTCGCTGTTTGTCGGCGCAAGCCGAATCACACC
AGCGGACCTATTGGACTGGCGTTCAGAAGCAACAGAAATATTCTTGATTAGTCGAGTTCCTCGATTAGTCGCGATATTAC
TCGCTGGCGCAGGGATGAGTATTGCAGGTTTGATTATGCAACAACTGAGCCGCAATAAATTTGTATCTCCCACCACAGCA
GGAACGTTGGATGCGACTAAACTGGGAATCTTGGTATCTATGTTGATATTTACCAACGCAACATTATTAGAAAAAATGGC
GGTTTCGTTCACATTCGCCTTGCTTGGCACTTTCTTGTTTATGCAAATTCTCGACCGTATTAAATTTAAAGACGCGATCT
TCATTCCGCTTGTTGGATTGATGTTCGGAAATATTTTATCTTCCATCGCCACATTTTTTGCATATAAAGCAAACGTGATC
CAGAATATGTCTGCTTGGCTTCAAGGAGATTTTTCCATGATCATGAAAGGCCGTTATGAGCTTTTGTATATTAGTATACC
TGTGTTGATCATTACATATTTATATGCGAATCGATTTACAGTGGCGGGTATGGGGGAAGACTTTTCCAAGAACTTAGGAC
TCGCTTATAAGAGTATCGTCAATATTGGGTTGATCTTAGTTGCGTTAATTACGACAACCGTTGTATTGACAGTGGGACTG
ATTCCTTTCCTAGGGTTAATCATTCCGAACATTGTCTCGATTTTTAAAGGAGACCATCTACAAAAGACGTTGCCGCATAC
TGCATTGCTAGGCGCAATCTTCCTTCTTATCTGTGACATTCTAGGCAGGGTTATTATCTTCCCTTATGAAATCTCGATCA
GTTTAATGGTCGGTGTCATCGGAAGCGCAATCTTCCTGTTCTTGTTGTTTAGGGGGAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2G5WWV8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.716

99.051

0.522

Multiple sequence alignment