Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KKK_RS24060 Genome accession   NZ_CP015202
Coordinates   5308889..5309290 (-) Length   133 a.a.
NCBI ID   WP_003249324.1    Uniprot ID   A0AAD2W8A3
Organism   Pseudomonas putida B6-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5303889..5314290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KKK_RS24045 (KKK_24050) - 5305853..5307877 (-) 2025 WP_223817433.1 methyl-accepting chemotaxis protein -
  KKK_RS24050 (KKK_24055) - 5307925..5308479 (-) 555 WP_003249330.1 chemotaxis protein CheW -
  KKK_RS24055 (KKK_24060) pilH 5308476..5308841 (-) 366 WP_014592657.1 twitching motility response regulator PilH -
  KKK_RS24060 (KKK_24065) pilG 5308889..5309290 (-) 402 WP_003249324.1 response regulator Regulator
  KKK_RS24065 (KKK_24070) gshB 5309529..5310482 (+) 954 WP_003249322.1 glutathione synthase -
  KKK_RS24070 (KKK_24075) - 5310574..5311479 (+) 906 WP_014754675.1 energy transducer TonB -
  KKK_RS24075 (KKK_24080) - 5311651..5312220 (+) 570 WP_003249318.1 YqgE/AlgH family protein -
  KKK_RS24080 (KKK_24085) ruvX 5312220..5312645 (+) 426 WP_003249316.1 Holliday junction resolvase RuvX -
  KKK_RS24085 (KKK_24090) pyrR 5312695..5313213 (+) 519 WP_003249313.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KKK_RS24090 (KKK_24095) - 5313226..5314230 (+) 1005 WP_003249311.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14632.88 Da        Isoelectric Point: 6.4772

>NTDB_id=177494 KKK_RS24060 WP_003249324.1 5308889..5309290(-) (pilG) [Pseudomonas putida B6-2]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFATPQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=177494 KKK_RS24060 WP_003249324.1 5308889..5309290(-) (pilG) [Pseudomonas putida B6-2]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTAATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCATCAGCCCAGCATCATTTTTG
TCGATGTGCTGATGCCACGCCTGGACGGCTACCAGACCTGCGCGGTTATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTTATCCTGCTGTCGTCCCGCGATGGGCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGTTCCGATCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGATGCGATCCGCGCCCATGTGCCCGGGTTCGCCACACCTCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632

Multiple sequence alignment