Detailed information NTG0177338

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: Bt4C1_RS27555
• Genome accession: NZ_CP015176
• Coordinates: 5393012..5394139 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470754.1
• Uniprot ID: A0A9W3P6A6
• Organism: Bacillus thuringiensis serovar alesti strain BGSC 4C1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5388012..5399139

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Bt4C1_RS27525 (Bt4C1_27530)	spoIIIJ	5388052..5388819 (-)	768	WP_000727741.1	YidC family membrane integrase SpoIIIJ	-
Bt4C1_RS27530 (Bt4C1_27535)	rnpA	5388872..5389219 (-)	348	WP_000726621.1	ribonuclease P protein component	-
Bt4C1_RS27535 (Bt4C1_27540)	rpmH	5389296..5389430 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
Bt4C1_RS27540 (Bt4C1_27545)	dnaA	5389995..5391335 (+)	1341	WP_000428018.1	chromosomal replication initiator protein DnaA	-
Bt4C1_RS27545 (Bt4C1_27550)	dnaN	5391514..5392659 (+)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
Bt4C1_RS27550 (Bt4C1_27555)	yaaA	5392787..5392999 (+)	213	WP_000680510.1	S4 domain-containing protein YaaA	-
Bt4C1_RS27555 (Bt4C1_27560)	recF	5393012..5394139 (+)	1128	WP_000470754.1	DNA replication/repair protein RecF	Machinery gene
Bt4C1_RS27560 (Bt4C1_27565)	gyrB	5394179..5396101 (+)	1923	WP_000435979.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
Bt4C1_RS27565 (Bt4C1_27570)	gyrA	5396190..5398661 (+)	2472	WP_063676281.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43318.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=177338 Bt4C1_RS27555 WP_000470754.1 5393012..5394139(+) (recF) [Bacillus thuringiensis serovar alesti strain BGSC 4C1]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEEFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPIYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKDAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=177338 Bt4C1_RS27555 WP_000470754.1 5393012..5394139(+) (recF) [Bacillus thuringiensis serovar alesti strain BGSC 4C1]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCACAAGGGAAAACAAACTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGAGTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTATATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGCGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGGCAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTAATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGCTGGATGATGTTTTATCA
GAATTAGACGATTATCGTCAATCACATCTGTTAAATACAATTCAAGGAAAGGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGATGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.033	98.133	0.648