Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   Bt4C1_RS20465 Genome accession   NZ_CP015176
Coordinates   4048237..4049031 (-) Length   264 a.a.
NCBI ID   WP_014894889.1    Uniprot ID   A0A9X0VUZ1
Organism   Bacillus thuringiensis serovar alesti strain BGSC 4C1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4043237..4054031
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bt4C1_RS20440 (Bt4C1_20445) - 4043789..4045861 (-) 2073 WP_000810981.1 sigma-54-dependent Fis family transcriptional regulator -
  Bt4C1_RS20445 (Bt4C1_20450) - 4045998..4046231 (+) 234 WP_001190195.1 DUF2627 domain-containing protein -
  Bt4C1_RS20450 (Bt4C1_20455) - 4046281..4047009 (-) 729 WP_000172594.1 glycerophosphodiester phosphodiesterase -
  Bt4C1_RS20455 (Bt4C1_20460) - 4047060..4047206 (+) 147 WP_001247671.1 YycC family protein -
  Bt4C1_RS20460 (Bt4C1_20465) - 4047420..4047983 (-) 564 WP_063675668.1 PRK06770 family protein -
  Bt4C1_RS20465 (Bt4C1_20470) spo0A 4048237..4049031 (-) 795 WP_014894889.1 sporulation transcription factor Spo0A Regulator
  Bt4C1_RS20470 (Bt4C1_20475) spoIVB 4049321..4050619 (-) 1299 WP_002000940.1 SpoIVB peptidase -
  Bt4C1_RS20475 (Bt4C1_20480) recN 4050738..4052477 (-) 1740 WP_063675669.1 DNA repair protein RecN Machinery gene
  Bt4C1_RS20480 (Bt4C1_20485) argR 4052742..4053191 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29385.15 Da        Isoelectric Point: 7.1175

>NTDB_id=177320 Bt4C1_RS20465 WP_014894889.1 4048237..4049031(-) (spo0A) [Bacillus thuringiensis serovar alesti strain BGSC 4C1]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLADKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=177320 Bt4C1_RS20465 WP_014894889.1 4048237..4049031(-) (spo0A) [Bacillus thuringiensis serovar alesti strain BGSC 4C1]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCTGCTCAAGA
TGATATGGAAGTAATAGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAGCAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTCGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment