Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   Bt4C1_RS19580 Genome accession   NZ_CP015176
Coordinates   3886812..3887270 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis serovar alesti strain BGSC 4C1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3881812..3892270
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bt4C1_RS19565 (Bt4C1_19570) - 3882482..3882718 (+) 237 WP_000283738.1 hypothetical protein -
  Bt4C1_RS19570 (Bt4C1_19575) - 3882879..3884987 (-) 2109 WP_063675640.1 polyphosphate kinase -
  Bt4C1_RS19575 (Bt4C1_19580) - 3885096..3886670 (-) 1575 WP_063675641.1 Ppx/GppA family phosphatase -
  Bt4C1_RS19580 (Bt4C1_19585) kre 3886812..3887270 (+) 459 WP_000804864.1 YkyB family protein Regulator
  Bt4C1_RS19585 (Bt4C1_19590) - 3887302..3887964 (-) 663 WP_000922470.1 YkyA family protein -
  Bt4C1_RS19590 (Bt4C1_19595) - 3888579..3889232 (-) 654 WP_000680815.1 diguanylate cyclase -
  Bt4C1_RS19595 (Bt4C1_19600) - 3889396..3889629 (+) 234 WP_063675642.1 SPP1 phage holin family protein -
  Bt4C1_RS19600 (Bt4C1_19605) - 3889662..3890162 (-) 501 WP_000708116.1 hypothetical protein -
  Bt4C1_RS19605 (Bt4C1_19610) - 3890566..3892107 (+) 1542 WP_000449901.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=177318 Bt4C1_RS19580 WP_000804864.1 3886812..3887270(+) (kre) [Bacillus thuringiensis serovar alesti strain BGSC 4C1]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=177318 Bt4C1_RS19580 WP_000804864.1 3886812..3887270(+) (kre) [Bacillus thuringiensis serovar alesti strain BGSC 4C1]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAGCGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGACCTGAAGCATTGAAAC
AAGAAAAAAAATTAAGTGAACCGGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment