Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   Bt4C1_RS06280 Genome accession   NZ_CP015176
Coordinates   1217661..1218344 (+) Length   227 a.a.
NCBI ID   WP_000350716.1    Uniprot ID   A0A9W5VN71
Organism   Bacillus thuringiensis serovar alesti strain BGSC 4C1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1212661..1223344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bt4C1_RS06260 (Bt4C1_06265) - 1213727..1215373 (+) 1647 WP_000727253.1 peptide ABC transporter substrate-binding protein -
  Bt4C1_RS06265 (Bt4C1_06270) - 1215401..1215604 (-) 204 WP_000559983.1 hypothetical protein -
  Bt4C1_RS06270 (Bt4C1_06275) spx 1216196..1216591 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  Bt4C1_RS06275 (Bt4C1_06280) - 1216641..1217315 (-) 675 WP_000362600.1 TerC family protein -
  Bt4C1_RS06280 (Bt4C1_06285) mecA 1217661..1218344 (+) 684 WP_000350716.1 adaptor protein MecA Regulator
  Bt4C1_RS06285 (Bt4C1_06290) - 1218417..1219961 (+) 1545 WP_000799189.1 cardiolipin synthase -
  Bt4C1_RS06290 (Bt4C1_06295) - 1220042..1221286 (+) 1245 WP_000628323.1 competence protein CoiA family protein -
  Bt4C1_RS06295 (Bt4C1_06300) pepF 1221338..1223164 (+) 1827 WP_000003356.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27009.07 Da        Isoelectric Point: 3.9986

>NTDB_id=177304 Bt4C1_RS06280 WP_000350716.1 1217661..1218344(+) (mecA) [Bacillus thuringiensis serovar alesti strain BGSC 4C1]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=177304 Bt4C1_RS06280 WP_000350716.1 1217661..1218344(+) (mecA) [Bacillus thuringiensis serovar alesti strain BGSC 4C1]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAGTTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment