Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BtBc_RS22000 | Genome accession | NZ_CP015150 |
| Coordinates | 4348324..4349367 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013180.1 | Uniprot ID | A0A9X5WLU9 |
| Organism | Bacillus thuringiensis strain Bc601 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4343324..4354367
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BtBc_RS21955 (BtBc_21955) | - | 4343755..4343955 (-) | 201 | WP_000106083.1 | YqzE family protein | - |
| BtBc_RS21960 (BtBc_21960) | - | 4343994..4344491 (-) | 498 | WP_000836650.1 | shikimate kinase | - |
| BtBc_RS21965 (BtBc_21965) | - | 4344607..4345257 (-) | 651 | WP_000183862.1 | 2OG-Fe(II) oxygenase | - |
| BtBc_RS21970 (BtBc_21970) | comGG | 4345434..4345805 (-) | 372 | WP_001231273.1 | competence type IV pilus minor pilin ComGG | - |
| BtBc_RS21975 (BtBc_21975) | comGF | 4345802..4346272 (-) | 471 | WP_000923099.1 | competence type IV pilus minor pilin ComGF | - |
| BtBc_RS21980 (BtBc_21980) | - | 4346242..4346544 (-) | 303 | WP_000829473.1 | hypothetical protein | - |
| BtBc_RS21985 (BtBc_21985) | comGD | 4346537..4346992 (-) | 456 | WP_000813142.1 | competence type IV pilus minor pilin ComGD | - |
| BtBc_RS21990 (BtBc_21990) | comGC | 4346989..4347288 (-) | 300 | WP_001178686.1 | competence type IV pilus major pilin ComGC | - |
| BtBc_RS21995 (BtBc_21995) | comGB | 4347300..4348331 (-) | 1032 | WP_000475193.1 | competence type IV pilus assembly protein ComGB | - |
| BtBc_RS22000 (BtBc_22000) | comGA | 4348324..4349367 (-) | 1044 | WP_001013180.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BtBc_RS22005 (BtBc_22005) | - | 4349573..4350268 (+) | 696 | WP_000434125.1 | helix-turn-helix domain-containing protein | - |
| BtBc_RS22010 (BtBc_22010) | - | 4350394..4350636 (+) | 243 | WP_000440721.1 | DUF2626 domain-containing protein | - |
| BtBc_RS22015 (BtBc_22015) | - | 4350743..4352137 (+) | 1395 | WP_001094330.1 | L-cystine transporter | - |
| BtBc_RS22020 (BtBc_22020) | - | 4352217..4352609 (-) | 393 | WP_000875388.1 | hypothetical protein | - |
| BtBc_RS22025 (BtBc_22025) | - | 4352697..4352912 (-) | 216 | WP_001008326.1 | DUF3912 family protein | - |
| BtBc_RS22030 (BtBc_22030) | - | 4353165..4353476 (+) | 312 | WP_001093237.1 | hypothetical protein | - |
| BtBc_RS22035 (BtBc_22035) | - | 4353511..4353999 (-) | 489 | WP_000764261.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39157.52 Da Isoelectric Point: 8.5482
>NTDB_id=177153 BtBc_RS22000 WP_001013180.1 4348324..4349367(-) (comGA) [Bacillus thuringiensis strain Bc601]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGHELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGHELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=177153 BtBc_RS22000 WP_001013180.1 4348324..4349367(-) (comGA) [Bacillus thuringiensis strain Bc601]
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCAGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTCGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGTTACTCGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAAGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGGGATGAGGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTACTATATGGACATGAGTTAAAACAAGCACTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCAGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTCGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGTTACTCGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAAGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGGGATGAGGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTACTATATGGACATGAGTTAAAACAAGCACTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.908 |
100 |
0.559 |