Detailed information NTG0177112

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IEC338SC_RS10560
• Genome accession: NZ_CP015145
• Coordinates: 2241974..2242789 (+)
• Length: 271 a.a.
• NCBI ID: WP_063098718.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain IEC338SC
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2236974..2247789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IEC338SC_RS10525 (IEC338SC_2114)	kdsB	2237500..2238261 (+)	762	WP_063098716.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IEC338SC_RS10530 (IEC338SC_2115)	holB	2238275..2239255 (+)	981	WP_063098717.1	DNA polymerase III subunit delta'	-
IEC338SC_RS10535 (IEC338SC_2116)	pilZ	2239266..2239607 (+)	342	WP_002121335.1	PilZ domain-containing protein	-
IEC338SC_RS10540 (IEC338SC_2117)	ycfH	2239625..2240398 (+)	774	WP_044100051.1	TatD family hydrolase	-
IEC338SC_RS10545 (IEC338SC_2118)	-	2240435..2241043 (+)	609	WP_014206595.1	TetR/AcrR family transcriptional regulator	-
IEC338SC_RS10550 (IEC338SC_2119)	-	2241050..2241604 (+)	555	WP_002121405.1	type II secretion system protein	-
IEC338SC_RS10555 (IEC338SC_2120)	xcpV	2241594..2241974 (+)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
IEC338SC_RS10560 (IEC338SC_2121)	xcpW	2241974..2242789 (+)	816	WP_063098718.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IEC338SC_RS10565 (IEC338SC_2122)	gspK	2242790..2243749 (+)	960	WP_039761082.1	type II secretion system minor pseudopilin GspK	-
IEC338SC_RS10570 (IEC338SC_2123)	-	2243977..2244573 (+)	597	WP_017386831.1	6-pyruvoyl trahydropterin synthase family protein	-
IEC338SC_RS10575 (IEC338SC_2124)	ung	2244627..2245340 (+)	714	WP_005069527.1	uracil-DNA glycosylase	-
IEC338SC_RS10580 (IEC338SC_2125)	hibch	2245337..2246461 (+)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
IEC338SC_RS10585 (IEC338SC_2126)	tadA	2246467..2246970 (+)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
IEC338SC_RS10590 (IEC338SC_2127)	-	2247041..2247481 (+)	441	WP_063098719.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30930.41 Da
• Isoelectric Point: 10.0236

>NTDB_id=177112 IEC338SC_RS10560 WP_063098718.1 2241974..2242789(+) (xcpW) [Acinetobacter pittii strain IEC338SC]
MIKNKCFRYPSTASRLAARSEQMMRGYSEQSSSSCAQTKLRFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQLQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKIQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=177112 IEC338SC_RS10560 WP_063098718.1 2241974..2242789(+) (xcpW) [Acinetobacter pittii strain IEC338SC]
ATGATAAAGAATAAATGTTTTCGCTATCCAAGCACCGCTTCACGTCTTGCGGCACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCTTCGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAACTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAACATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATACAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738